DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and GUN1

DIOPT Version :10

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_180698.1 Gene:GUN1 / 817698 AraportID:AT2G31400 Length:918 Species:Arabidopsis thaliana


Alignment Length:627 Identity:135/627 - (21%)
Similarity:233/627 - (37%) Gaps:132/627 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 ETKREANRNQNPFREEVF--------EELITAAP---KEHQKFKPEKKPK---------EKSTKK 105
            :|::..|.|..|:.....        ..:.|.||   .:...|.|.:.||         .:||:.
plant    80 QTRQNPNYNHRPYGASSSPRGSAPPPSSVATVAPAQLSQPPNFSPLQTPKSDLSSDFSGRRSTRF 144

  Fly   106 V--QDFG-DPDTFGDAKVAATED--------PGDVEEEEFLSNSTRRSKKLKAVEYARQIKDHL- 158
            |  ..|| ...|......:|.||        .||  :|.|.|.......||...:....|...| 
plant   145 VSKMHFGRQKTTMATRHSSAAEDALQNAIDFSGD--DEMFHSLMLSFESKLCGSDDCTYIIRELG 207

  Fly   159 KANRLNEAIAVLEQRMLKEDRAKPDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYT 223
            ..|..::|:...|..:.:|.|......:.:.:||...:.|....|..::......|...|...::
plant   208 NRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272

  Fly   224 SLFNACANAPSVSDGLAKAQI-LRENMLEKGYEPNVKNYNAMIKAYGRCG-DVDTAYMLADEMME 286
            :|.:|...:     ||.:..| :..:|.|.|..||:..|||:|.|.|:.| :........|||..
plant   273 ALISAYGRS-----GLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332

  Fly   287 RQLELNADTFNFLLQACASNSEHGFRHALLT-WHNMLQRGISPDYYSFNAMLRCARDCGFGDLDS 350
            ..::.:..|||.||..|   |..|...|... :..|..|.|..|.:|:|.:|...  |..|.:|.
plant   333 NGVQPDRITFNSLLAVC---SRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAI--CKGGQMDL 392

  Fly   351 MREVIDKIAPSAARKKPVLQLEKGQQDDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLG 415
            ..|::.::        ||.::       :|:|.:.:|.:..   .|......|..||.....:||
plant   393 AFEILAQM--------PVKRI-------MPNVVSYSTVIDG---FAKAGRFDEALNLFGEMRYLG 439

  Fly   416 SLVALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEVIPPTNAAEKQL--LTFVRK 478
              :||:.|                              ::..:|.:......:|:.|  |..:..
plant   440 --IALDRV------------------------------SYNTLLSIYTKVGRSEEALDILREMAS 472

  Fly   479 IGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALGCR---TQEEARELL 540
            :|:|.|:..:|.|:.....:..|:..|:|...::...:.|:::||..|..|..   ..:||.|:.
plant   473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIF 537

  Fly   541 EQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEGLKPN--------EAFLRHLHNFH 597
            .:...||::.::.:..|::...|.|........:|....:||:.||        :||        
plant   538 REFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF-------- 594

  Fly   598 RGCARAIDARHPSTKTAAFKKGHSKFCDKYRLYYEEQGLSGL 639
             |.:..:|      ::|.:..|.|       |.:....||.|
plant   595 -GRSATMD------RSADYSNGGS-------LPFSSSALSAL 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PLN03218 <166..>561 CDD:215636 87/402 (22%)
PPR repeat 186..213 CDD:276811 4/26 (15%)
PPR repeat 219..252 CDD:276811 6/33 (18%)
PPR repeat 258..287 CDD:276811 10/29 (34%)
PPR repeat 293..324 CDD:276811 10/31 (32%)
PPR repeat 330..357 CDD:276811 7/26 (27%)
PPR repeat 485..514 CDD:276811 5/28 (18%)
PPR repeat 552..576 CDD:276811 3/23 (13%)
GUN1NP_180698.1 PPR repeat 237..262 CDD:276811 4/24 (17%)
PPR repeat 270..297 CDD:276811 6/31 (19%)
PLN03218 <277..>702 CDD:215636 94/428 (22%)
PPR repeat 303..333 CDD:276811 10/29 (34%)
PPR repeat 339..368 CDD:276811 10/31 (32%)
PPR repeat 376..403 CDD:276811 8/36 (22%)
PPR repeat 411..438 CDD:276811 5/29 (17%)
PPR repeat 444..473 CDD:276811 5/58 (9%)
PPR repeat 479..508 CDD:276811 5/28 (18%)
PPR repeat 514..543 CDD:276811 7/28 (25%)
PPR repeat 549..578 CDD:276811 4/28 (14%)
PPR repeat 675..702 CDD:276811
SMR 781..872 CDD:214676
Blue background indicates that the domain is not in the aligned region.

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