DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4611 and AT2G17670

DIOPT Version :9

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_565422.1 Gene:AT2G17670 / 816274 AraportID:AT2G17670 Length:463 Species:Arabidopsis thaliana


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PPR_2 <157..196 CDD:289786
PPR_2 182..231 CDD:289786
PPR 185..215 CDD:279828
PPR repeat 186..213 CDD:276811
PPR repeat 219..252 CDD:276811
PPR_1 252..284 CDD:289614
PPR_2 256..304 CDD:289786
PPR repeat 258..287 CDD:276811
PPR repeat 293..324 CDD:276811
PPR repeat 330..357 CDD:276811
PPR repeat 485..514 CDD:276811
PPR repeat 552..576 CDD:276811
AT2G17670NP_565422.1 PPR repeat 124..153 CDD:276811
PLN03218 <149..>431 CDD:215636
PPR repeat 159..188 CDD:276811
PPR repeat 194..223 CDD:276811
PPR repeat 232..259 CDD:276811
PPR repeat 267..294 CDD:276811
PPR repeat 302..329 CDD:276811
PPR repeat 335..364 CDD:276811
PPR repeat 370..399 CDD:276811
PPR repeat 405..429 CDD:276811
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 54 1.000 Domainoid score I4170
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.