DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG4611 and AT2G06000

DIOPT Version :9

Sequence 1:	NP_647949.1	Gene:	CG4611 / 38601	FlyBaseID:	FBgn0035591	Length:	703	Species:	Drosophila melanogaster
Sequence 2:	NP_178657.1	Gene:	AT2G06000 / 815153	AraportID:	AT2G06000	Length:	536	Species:	Arabidopsis thaliana

Alignment Length:	365	Identity:	83/365 - (22%)
Similarity:	140/365 - (38%)	Gaps:	86/365 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    88 EHQKFKPEKKPKE------------KSTKKVQDFGDPDTFG---DAKVAATEDPGDVEEEEFLSN 137
            ||.:|:.....|.            |:.|.::..|....||   |.....|...|..:..| |:.
plant   196 EHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNE-LNK 259

  Fly   138 STRRSKKLKA--------VEYARQIKDHLKANRLNEAIAVLEQRM-------------------- 174
            ::...|.:|:        |.|...|..:.||.::.||.::|:..:
plant   260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK 324

  Fly   175 ------LKEDRAK-------PDKYIYNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLF 226
                  .:|.|.|       ||...:..||.|..:.|...:.|.|:.:|..||:.....||:.|.
plant   325 AGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILI 389

  Fly   227 NACANAPSVSDGLAKAQILRENMLEKGYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLEL 291
            ||..|    .:.|.||:.|...:..|...|....||.:|..:.:.|.|:.|.::.:||.:::.:.
plant   390 NALCN----ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKP 450

  Fly   292 NADTFNFLLQA-CASNSEHGFRHALLTWHNMLQRGISPDYYSFNAMLRCARDCGFGDLDSMREV- 354
            :..||..|:.. |....   ...|:..:|.|:..|.|||..:.:::|.|....|..     :|.
plant   451 DKITFTILIIGHCMKGR---MFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMA-----KEAY 507

  Fly   355 -IDKIAPSAARKKPVLQLEKGQQDDLPSVEANT--TTLPA 391
             :::||            .|||.:::..:|..|  .||.|
plant   508 HLNQIA------------RKGQSNNVVPLETKTANATLAA 535

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4611	NP_647949.1	PPR_2	<157..196	CDD:289786	13/71 (18%)
		PPR_2	182..231	CDD:289786	16/48 (33%)
		PPR	185..215	CDD:279828	8/29 (28%)
		PPR repeat	186..213	CDD:276811	7/26 (27%)
		PPR repeat	219..252	CDD:276811	10/32 (31%)
		PPR_1	252..284	CDD:289614	8/31 (26%)
		PPR_2	256..304	CDD:289786	12/48 (25%)
		PPR repeat	258..287	CDD:276811	8/28 (29%)
		PPR repeat	293..324	CDD:276811	7/31 (23%)
		PPR repeat	330..357	CDD:276811	4/28 (14%)
		PPR repeat	485..514	CDD:276811
		PPR repeat	552..576	CDD:276811
AT2G06000	NP_178657.1	PPR	105..134	CDD:279828
		PPR repeat	105..132	CDD:276811
		PPR repeat	175..200	CDD:276811	2/3 (67%)
		PPR_2	205..253	CDD:289786	9/47 (19%)
		PPR	208..241	CDD:273253	5/32 (16%)
		PPR repeat	208..235	CDD:276811	3/26 (12%)
		PPR_1	236..266	CDD:289614	6/30 (20%)
		PPR_2	239..289	CDD:289786	10/50 (20%)
		PPR repeat	241..270	CDD:276811	6/29 (21%)
		PPR_1	273..303	CDD:289614	8/29 (28%)
		PPR_2	275..324	CDD:289786	8/48 (17%)
		PPR repeat	279..306	CDD:276811	7/26 (27%)
		PPR repeat	312..341	CDD:276811	3/28 (11%)
		PPR	313..347	CDD:273253	4/33 (12%)
		PPR_1	342..373	CDD:289614	8/30 (27%)
		PPR_2	345..394	CDD:289786	16/48 (33%)
		PPR repeat	347..373	CDD:276811	6/25 (24%)
		PPR_1	376..407	CDD:289614	12/34 (35%)
		PPR repeat	382..411	CDD:276811	10/32 (31%)
		PPR repeat	417..446	CDD:276811	8/28 (29%)
		PPR	418..451	CDD:273253	8/32 (25%)
		PPR_2	420..463	CDD:289786	11/42 (26%)
		PPR_1	446..479	CDD:289614	6/35 (17%)
		PPR_2	450..499	CDD:289786	13/51 (25%)
		PPR repeat	452..479	CDD:276811	6/29 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000