DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4611 and AT5G66631

DIOPT Version :9

Sequence 1:NP_647949.1 Gene:CG4611 / 38601 FlyBaseID:FBgn0035591 Length:703 Species:Drosophila melanogaster
Sequence 2:NP_001119513.1 Gene:AT5G66631 / 6240924 AraportID:AT5G66631 Length:661 Species:Arabidopsis thaliana


Alignment Length:562 Identity:99/562 - (17%)
Similarity:201/562 - (35%) Gaps:148/562 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 GDVEE-----EEFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYI 186
            ||.:.     :|:..:...:....::.....|:  ::...:.:||:...:|  :..:...|:...
plant   154 GDFDSVLKTWDEYRCSGEEKKGCTESYNIVMQV--YMTLGKDSEAVQTFDQ--IINEGGIPNSRT 214

  Fly   187 YNLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSV-----------SDGLA 240
            :.::|....|.|....|..::..:....:..|...|:.|..|..:|...           |||..
plant   215 FTIMIEHLVKLGNLDAAMKIFETLPLMRITRTLKHYSVLVEAFVDAQRFDEVKTLIAEMKSDGKF 279

  Fly   241 KAQILRE---NMLEKGYEPNVKNYNAMIKAYGRCGDV------------DTAYMLADEMMERQLE 290
            .::.:.|   .|.|.|:|...:.:...:....|..|:            |......|::.|.|::
plant   280 PSRRMLEPLKRMREAGFEHETEEFLREMLPDERIKDISMYSMDNPSDSEDEGDEYKDDVNEAQVK 344

  Fly   291 ----LNADTFNFLLQACASNSEHGFRHALLTWHNML-----------------------QRGISP 328
                |:.......|:..:|::......|...|.|:|                       |.|.:.
plant   345 LKPWLDPKALATSLKKWSSDAVTALEEANFVWTNLLVCKMLRNFRAPETAWSFFCWVAIQPGFTH 409

  Fly   329 DYYSFNAML-RCARDCGFGDLDSMREVIDKIAPSAAR----------------KKPVLQLEKGQQ 376
            |.|:...|: ..||:   |.::.:.::|.|:.....:                |||...::...:
plant   410 DAYTIERMMAMLARN---GQVELVDKLISKVRIEGIKLPFSTIRLIIDLYGISKKPEAAIKVFNE 471

  Fly   377 DDLPSVEANTTTLPAQIEVATTASELELPNLLLPQPHLGSLVALEEVTRPHERFLLLGGLTGFLE 441
            |         .||...|      |:..|  :||....|.:|...:......|.          ||
plant   472 D---------RTLCGSI------SDFNL--MLLYSSLLRTLTKCKRNAEALET----------LE 509

  Fly   442 HMKQHNITPDIETFTAML-------EVIPPTNAAEKQLLTFVRKIGLKADIDFFNILIK-----K 494
            .|....::|||:||:.::       |:     ...::|.:.||:|||:.|.....:|::     :
plant   510 DMMLTGVSPDIQTFSGLMYHFALQGEI-----QTVERLFSMVRQIGLEPDPYMLKLLVQAYCRCE 569

  Fly   495 RSMRFDYESAKEVLLMIRTAGLRPDIVTYGVLALGCRTQEEARELLEQMHVAGIKMNMPILGAML 559
            ||:     .|..|...::.:.|.||..|..:|......:|:.:|      .|.::.:       .
plant   570 RSV-----LAYRVFQDMKDSNLMPDRETKELLVKSLWREEKRKE------AAAVEES-------Y 616

  Fly   560 RQGCANKSFSYVNEIIQLSLEEGL-KPNEAFLRHLHNFHRGC 600
            .:...||:.|   .:::|:|:..: ..:...:..::|.:|.|
plant   617 EEENDNKNSS---NVLRLALKGHVWTISSTDISRVYNLYRDC 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4611NP_647949.1 PPR_2 <157..196 CDD:289786 5/38 (13%)
PPR_2 182..231 CDD:289786 9/48 (19%)
PPR 185..215 CDD:279828 4/29 (14%)
PPR repeat 186..213 CDD:276811 4/26 (15%)
PPR repeat 219..252 CDD:276811 9/46 (20%)
PPR_1 252..284 CDD:289614 6/43 (14%)
PPR_2 256..304 CDD:289786 8/63 (13%)
PPR repeat 258..287 CDD:276811 4/40 (10%)
PPR repeat 293..324 CDD:276811 6/53 (11%)
PPR repeat 330..357 CDD:276811 6/27 (22%)
PPR repeat 485..514 CDD:276811 5/33 (15%)
PPR repeat 552..576 CDD:276811 3/23 (13%)
AT5G66631NP_001119513.1 PPR repeat 142..174 CDD:276811 3/19 (16%)
PPR_2 179..224 CDD:289786 6/48 (13%)
PPR repeat 179..206 CDD:276811 4/30 (13%)
PPR_2 210..257 CDD:289786 8/46 (17%)
PPR repeat 212..241 CDD:276811 4/28 (14%)
PPR repeat 247..276 CDD:276811 4/28 (14%)
PPR repeat 411..440 CDD:276811 7/31 (23%)
PPR repeat 446..482 CDD:276811 8/50 (16%)
PPR repeat 488..514 CDD:276811 6/35 (17%)
PPR repeat 520..549 CDD:276811 7/33 (21%)
PPR repeat 555..584 CDD:276811 5/33 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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