Sequence 1: | NP_647949.1 | Gene: | CG4611 / 38601 | FlyBaseID: | FBgn0035591 | Length: | 703 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006248933.1 | Gene: | Ptcd1 / 304278 | RGDID: | 1311473 | Length: | 686 | Species: | Rattus norvegicus |
Alignment Length: | 726 | Identity: | 209/726 - (28%) |
---|---|---|---|
Similarity: | 329/726 - (45%) | Gaps: | 120/726 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MALRLISRSMS-CHIRGLQLNATGRRLNSYNISRLVILPAT-WSCSQNRLLHVRITDQQAGLETK 63
Fly 64 R------EANRNQNPFREEVFEELITAAPKEHQKFKPEKKPKEKSTKKVQDFGDPDTFGDAKVAA 122
Fly 123 TEDPGDVEEEEFLSNSTRRSKKLKAVEYARQIKDHLKANRLNEAIAVLEQRMLKEDRAKPDKYIY 187
Fly 188 NLLISGCAKAGYTRKAFFLYTKMRQRGLQVTGGTYTSLFNACANAPSVSDGLAKAQILRENMLEK 252
Fly 253 GYEPNVKNYNAMIKAYGRCGDVDTAYMLADEMMERQLELNADTFNFLLQACASNSEHGFRHALLT 317
Fly 318 WHNMLQRGISPDYYSFNAMLRCARDCGFGD--------LDSMREVIDKIAPSAARK--------- 365
Fly 366 -------KPVLQLEK-------GQQDDLPSVEANTTTLPAQIEVATTAS---------------E 401
Fly 402 LELP-NLLLPQPHLGSL----VALEEVTRPHERFLLLGGLTGFLEHMKQHNITPDIETFTAMLEV 461
Fly 462 IPPTNAAEKQLLTFVRKIGLKADIDFFNILIKKRSMRFDYESAKEVLLMIRTAGLRPDIVTYGVL 526
Fly 527 ALGCRTQEEARELLEQMHVAGIKMNMPILGAMLRQGCANKSFSYVNEIIQLSLEEGLKPNEAFLR 591
Fly 592 HLHNFHRGCARAIDARHPST------KTAAFKKGHSKFCDKYRLYYEEQGLSGLKLEDAIAKVKE 650
Fly 651 RPYDQFKLPPV 661 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG4611 | NP_647949.1 | PPR_2 | <157..196 | CDD:289786 | 17/38 (45%) |
PPR_2 | 182..231 | CDD:289786 | 22/48 (46%) | ||
PPR | 185..215 | CDD:279828 | 13/29 (45%) | ||
PPR repeat | 186..213 | CDD:276811 | 12/26 (46%) | ||
PPR repeat | 219..252 | CDD:276811 | 13/32 (41%) | ||
PPR_1 | 252..284 | CDD:289614 | 7/31 (23%) | ||
PPR_2 | 256..304 | CDD:289786 | 13/47 (28%) | ||
PPR repeat | 258..287 | CDD:276811 | 7/28 (25%) | ||
PPR repeat | 293..324 | CDD:276811 | 13/30 (43%) | ||
PPR repeat | 330..357 | CDD:276811 | 13/34 (38%) | ||
PPR repeat | 485..514 | CDD:276811 | 13/28 (46%) | ||
PPR repeat | 552..576 | CDD:276811 | 3/23 (13%) | ||
Ptcd1 | XP_006248933.1 | PLN03218 | <120..>322 | CDD:215636 | 71/201 (35%) |
PPR_2 | 165..208 | CDD:404055 | 20/42 (48%) | ||
PPR repeat | 165..191 | CDD:276811 | 12/25 (48%) | ||
PPR repeat | 197..230 | CDD:276811 | 13/32 (41%) | ||
PPR repeat | 236..265 | CDD:276811 | 7/28 (25%) | ||
PPR repeat | 271..302 | CDD:276811 | 13/30 (43%) | ||
PPR repeat | 512..538 | CDD:276811 | 11/25 (44%) | ||
PPR repeat | 544..570 | CDD:276811 | 8/25 (32%) | ||
PPR_2 | <556..585 | CDD:404055 | 5/28 (18%) | ||
PPR repeat | 576..605 | CDD:276811 | 3/28 (11%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 139 | 1.000 | Domainoid score | I4702 |
eggNOG | 1 | 0.900 | - | - | E33208_3BFSV | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H33161 | |
Inparanoid | 1 | 1.050 | 253 | 1.000 | Inparanoid score | I3125 |
OMA | 1 | 1.010 | - | - | QHG54853 | |
OrthoDB | 1 | 1.010 | - | - | D195242at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007295 | |
OrthoInspector | 1 | 1.000 | - | - | oto95696 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_106729 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR24014 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X5397 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.880 |