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Protein Alignment CHMP2B and LOL2
DIOPT Version :9
Sequence 1: | NP_647947.1 |
Gene: | CHMP2B / 38599 |
FlyBaseID: | FBgn0035589 |
Length: | 212 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_193892.1 |
Gene: | LOL2 / 828248 |
AraportID: | AT4G21610 |
Length: | 155 |
Species: | Arabidopsis thaliana |
Alignment Length: | 21 |
Identity: | 7/21 - (33%) |
Similarity: | 15/21 - (71%) |
Gaps: | 0/21 - (0%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 LRKATRDIERERRKMEEEERK 43
:::.|:..|::.|:.||||.:
plant 4 IQQQTQKEEQKHREEEEEEEE 24
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CHMP2B | NP_647947.1 |
Snf7 |
18..186 |
CDD:281366 |
7/21 (33%) |
LOL2 | NP_193892.1 |
LSD1 |
60..90 |
CDD:130125 |
|
zf-LSD1 |
101..125 |
CDD:399727 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1480977at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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