DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHMP2B and chmp2a

DIOPT Version :10

Sequence 1:NP_647947.1 Gene:CHMP2B / 38599 FlyBaseID:FBgn0035589 Length:212 Species:Drosophila melanogaster
Sequence 2:NP_001005008.1 Gene:chmp2a / 448496 XenbaseID:XB-GENE-1005459 Length:220 Species:Xenopus tropicalis


Alignment Length:215 Identity:72/215 - (33%)
Similarity:134/215 - (62%) Gaps:9/215 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IFGKKPTVKEQQRENDRSLRKATRDIERERRKMEEEERKLELEIRRNAAAGNNDACRILAKQLVE 69
            :||::.|.:|..|:|.|:|.||.|:::|||:|:|::|:|:..:|::.|..|..||.:|:||.||.
 Frog     4 LFGRRKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVR 68

  Fly    70 IRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAMGTTAKTMGEMNKVMRPEAIGETVRQFQAAN 134
            .|:...:.......||::..:.:.:.:|.::::||....|.|..||:.::...|.:.:.:|:..:
 Frog    69 TRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQS 133

  Fly   135 MKMEMTDEMINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIPATGSSDFETSGKRTE 199
            ..|:|.:||:||.:||.:.:..|||||:|||::||||:|:.::.::|::|:||.|......|:.|
 Frog   134 EIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGE 198

  Fly   200 ---------KDIADQLAKLR 210
                     .|:.::|..||
 Frog   199 PSAALADADADLEERLNNLR 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHMP2BNP_647947.1 Snf7 18..186 CDD:460896 58/167 (35%)
chmp2aNP_001005008.1 Snf7 17..185 CDD:460896 58/167 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..208 7/28 (25%)
MIT-interacting motif 208..218 2/9 (22%)

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