Protein Alignment CHMP2B and Chmp1a

DIOPT Version :9

• Sequence 1: NP_647947.1
• Gene: CHMP2B / 38599
• FlyBaseID: FBgn0035589
• Length: 212
• Species: Drosophila melanogaster
• Sequence 2: NP_001076782.1
• Gene: Chmp1a / 365024
• RGDID: 1311083
• Length: 196
• Species: Rattus norvegicus
• Alignment Length: 215
• Identity: 43/215 - (20%)
• Similarity: 99/215 - (46%)
• Gaps: 23/215 - (10%)

  Fly     1 MFNNIFGKKPTVKEQQRENDRSLRKATRDIERERRKMEEEERKLELEIRR----NAAAGNNDACR 61
            |.:.:|..|.|.|:.    ::..:||.:|.:.|:.|:::..::..:|..|    ||....|:...
  Rat     1 MDDTLFQLKFTAKQL----EKLAKKAEKDSKAEQAKVKKALQQKNVECARVYAENAIRKKNEGVN 61

  Fly    62 ILAKQLVEIRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAMGTTAKTMGEMNKVMRPEAIGET 126
            .|        :..||..|.|.|:|: ....|.:..|      |....|.:.:....|..:.:...
  Rat    62 WL--------RMASRVDAVASKVQT-AVTMKGVTKN------MAQVTKALDKALSAMDLQKVSAV 111

  Fly   127 VRQFQAANMKMEMTDEMINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIPATGSSDF 191
            :.:|:.....:::...::.|::......:..:|:.::::.::.:|.|:|:..::|.:|...|:..
  Rat   112 MDRFEQQVQNLDVHTSVMEDSVSSATTLTTPQEQVDSLIVQIAEENGLEVLDQLSQLPEGASAVG 176

  Fly   192 ETSGKRTEKDIADQLAKLRS 211
            |:|.:..|..::.:||.||:
  Rat   177 ESSVRSQEDQLSRRLAALRN 196

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CHMP2B	NP_647947.1	Snf7	18..186	CDD:281366	30/171 (18%)
Chmp1a	NP_001076782.1	Snf7	12..195	CDD:419749	37/201 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5491
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810