DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHMP2B and CHMP2A

DIOPT Version :10

Sequence 1:NP_647947.1 Gene:CHMP2B / 38599 FlyBaseID:FBgn0035589 Length:212 Species:Drosophila melanogaster
Sequence 2:XP_005258803.1 Gene:CHMP2A / 27243 HGNCID:30216 Length:265 Species:Homo sapiens


Alignment Length:194 Identity:68/194 - (35%)
Similarity:123/194 - (63%) Gaps:0/194 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IFGKKPTVKEQQRENDRSLRKATRDIERERRKMEEEERKLELEIRRNAAAGNNDACRILAKQLVE 69
            :||::.|.:|..|:|.|:|.:|.|:::|||:|:|.:|:|:..:|::.|..|..||.||:||.||.
Human     4 LFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVR 68

  Fly    70 IRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAMGTTAKTMGEMNKVMRPEAIGETVRQFQAAN 134
            .|:...:.......||::..:.:.:.:|.::::||....|.||.||:.::...|.:.:.:|:...
Human    69 TRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQA 133

  Fly   135 MKMEMTDEMINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIPATGSSDFETSGKRT 198
            ..|:|.:||:||.:||.:.:..|||||:|||::||||:|:.::.::||..:...:.|.|.|..|
Human   134 EIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSSECSKSWTPFPTQGPAT 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHMP2BNP_647947.1 Snf7 18..186 CDD:460896 59/167 (35%)
CHMP2AXP_005258803.1 Snf7 17..181 CDD:460896 57/163 (35%)

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