DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHMP2B and Vps24

DIOPT Version :10

Sequence 1:NP_647947.1 Gene:CHMP2B / 38599 FlyBaseID:FBgn0035589 Length:212 Species:Drosophila melanogaster
Sequence 2:XP_309652.2 Gene:Vps24 / 1270924 VectorBaseID:AGAMI1_006589 Length:221 Species:Anopheles gambiae


Alignment Length:222 Identity:60/222 - (27%)
Similarity:111/222 - (50%) Gaps:18/222 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IFGKKP--TVKEQQRENDRSLRKATRDIERERRKMEEEERKLELEIRRNAAAGNNDACRILAKQL 67
            :|||..  ..|:..:|....|||.:..::|:.|.::.||.|::..::..|...:.:.|.||||:|
Mosquito     3 LFGKSQDRNPKDMVQEWSSKLRKESFALDRQVRSIQREEDKIKRSLKEAAKKNDKEVCTILAKEL 67

  Fly    68 VEIRKQKSRTYAAAGKIQSIGYQNKNMGANIALSEAMGTTAKTMGEMNKVMRPEAIGETVRQFQA 132
            :..||..::.|.:...|.|:..|.||..|.:.::.::..:.:.|..|..:::...:..::|:...
Mosquito    68 IRSRKAINKIYTSKAHINSVQLQMKNQMATVRVAGSLAKSTEVMQAMQALVKLPEVAASMREMSK 132

  Fly   133 ANMKMEMTDEMINDTLDDMLNESGDEEESNAVVNKVLDEIGIEISGKMSSIPAT---GSSDFETS 194
            ..||..:.:|||::|::.:.:....|||:...::.||.||   .:||:...|||   ..:..|.|
Mosquito   133 EMMKAGIIEEMIDETMESLEDVEEMEEEAQKEIDHVLWEI---TAGKLGEAPATPLANPTKDEPS 194

  Fly   195 GKRTEKDIADQ----------LAKLRS 211
            ..|.|.:.||:          |..|||
Mosquito   195 TSRAEAEDADEEDDMKEMQNRLQALRS 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHMP2BNP_647947.1 Snf7 18..186 CDD:460896 44/167 (26%)
Vps24XP_309652.2 Snf7 18..184 CDD:460896 45/168 (27%)

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