DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and CAM1

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_015277.1 Gene:CAM1 / 856059 SGDID:S000005969 Length:415 Species:Saccharomyces cerevisiae


Alignment Length:170 Identity:31/170 - (18%)
Similarity:47/170 - (27%) Gaps:76/170 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PYNFHAQKVLMVFYEKKIDFFP--------------YVVDLCNGEQYSNWFLNL----------- 73
            |||..:....|...:|.:|.|.              .:.||.....::.:|.:|           
Yeast   123 PYNKKSVDSAMDAVDKIVDIFENRLKNYTYLATENISLADLVAASIFTRYFESLFGTEWRAQHPA 187

  Fly    74 -----NPKGDVPVLQDGALVIPSSTHIINYVESKFRGDRSLKPAHNSKEFDQMLIFEQAMARLPV 133
                 |.....|.|:|            .|.:.|| .|:.|.|....||       ::|.|..|.
Yeast   188 IVRWFNTVRASPFLKD------------EYKDFKF-ADKPLSPPQKKKE-------KKAPAAAPA 232

  Fly   134 GT--------------------------LSLGSFIHDDLK 147
            .:                          |...:|:.||.|
Yeast   233 ASKKKEEAKPAATETETSSKKPKHPLELLGKSTFVLDDWK 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 31/170 (18%)
GST_C_family 178..285 CDD:470672
CAM1NP_015277.1 GST_N_EF1Bgamma 4..73 CDD:239342
GST_C_EF1Bgamma_like 92..214 CDD:198290 19/103 (18%)
EF1G 255..359 CDD:459888 5/18 (28%)
Blue background indicates that the domain is not in the aligned region.

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