DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and URE2

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_014170.1 Gene:URE2 / 855492 SGDID:S000005173 Length:354 Species:Saccharomyces cerevisiae


Alignment Length:252 Identity:54/252 - (21%)
Similarity:89/252 - (35%) Gaps:78/252 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 PANKPVLFFH---PYNFHAQKVLMVFYEKKIDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQD- 84
            |.....||.|   |..|   ||.:|..|....:....:|...||..:..|:::||...||.|.| 
Yeast   110 PLEGYTLFSHRSAPNGF---KVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDH 171

  Fly    85 ----------GALVIPSSTHIIN--YVESKFRGDRSL--KPAHNSKEFDQMLIFEQAMARLPVGT 135
                      ||:::    |::|  |.|:   |:..|  ....:..:.:..|.|:.:        
Yeast   172 GMDNLSIWESGAILL----HLVNKYYKET---GNPLLWSDDLADQSQINAWLFFQTS-------- 221

  Fly   136 LSLGSFIHDDLKLVPKAPFIGPVRQSCLKNNEKVLDLLRHSVDE-----------QATKKAALQH 189
                          ..||.||........:::|:...:....||           .|.::.||..
Yeast   222 --------------GHAPMIGQALHFRYFHSQKIASAVERYTDEVRRVYGVVEMALAERREALVM 272

  Fly   190 KLDIQLRRHELASSREEFQKVLDAVRHFLLYVEQELTAQAPRVEWLTGDELSVADIS 246
            :||.     |.|::.......:...|.|...|            ||.||:|::||::
Yeast   273 ELDT-----ENAAAYSAGTTPMSQSRFFDYPV------------WLVGDKLTIADLA 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 53/246 (22%)
GST_C_family 178..285 CDD:470672 19/80 (24%)
URE2NP_014170.1 GST_N_Ure2p_like 114..194 CDD:239346 23/86 (27%)
GST_C_Ure2p 208..350 CDD:198326 26/144 (18%)

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