DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and TEF4

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_012842.1 Gene:TEF4 / 853781 SGDID:S000001564 Length:412 Species:Saccharomyces cerevisiae


Alignment Length:222 Identity:49/222 - (22%)
Similarity:70/222 - (31%) Gaps:89/222 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 LQDGALVIPSSTHIINYVE----SKFRGDRSLKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFI 142
            :..|.|.|..|..  ||..    |.|:.|..:.....|.||..:...:||.|             
Yeast     1 MSQGTLYINRSPR--NYASEALISYFKLDVKIVDLEQSSEFASLFPLKQAPA------------- 50

  Fly   143 HDDLKLVPKAPFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKL-----DIQLRRHELAS 202
                       |:||          |.|.|         |:..|:|..|     |.:.|...|.|
Yeast    51 -----------FLGP----------KGLKL---------TEALAIQFYLANQVADEKERARLLGS 85

  Fly   203 SREEFQKVL------------DAVRHFLL------YVEQELTAQAPRVEWLTG-------DELSV 242
            ...|..::|            :..|.||.      |.::::.|...:::.|..       |...|
Yeast    86 DVIEKSQILRWASLANSDVMSNIARPFLSFKGLIPYNKKDVDACFVKIDNLAAVFDARLRDYTFV 150

  Fly   243 A--DISLGLLLHRLYQLGFENQFWTFG 267
            |  :||||    .|:..|    .|.||
Yeast   151 ATENISLG----DLHAAG----SWAFG 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 49/222 (22%)
GST_C_family 178..285 CDD:470672 28/122 (23%)
TEF4NP_012842.1 GST_N_EF1Bgamma 4..72 CDD:239342 25/112 (22%)
GST_C_EF1Bgamma_like 89..211 CDD:198290 20/89 (22%)
EF1G 253..356 CDD:459888
Blue background indicates that the domain is not in the aligned region.

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