DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and AT1G57720

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_176084.1 Gene:AT1G57720 / 842147 AraportID:AT1G57720 Length:413 Species:Arabidopsis thaliana


Alignment Length:279 Identity:66/279 - (23%)
Similarity:95/279 - (34%) Gaps:94/279 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LFFHPY--NFHAQKVLM------VFYEKKIDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQDGA 86
            |..|.|  |..|.|.|:      |..|:..||...|.:      .|..||.:||.|.||||:...
plant     3 LVMHTYKGNKGANKALIAAEYAGVKIEESADFQMGVTN------KSPEFLKMNPIGKVPVLETPE 61

  Fly    87 LVIPSSTHIINYVESKFRGDRSLKPAHNSKEFDQMLIFEQ--AMARLPVGTLSLGSFIHDDLKLV 149
            ..|..|..|..||..| .||.||    |.....:....||  ..:.|.:....|..|       .
plant    62 GPIFESNAIARYVSRK-NGDNSL----NGSSLIEYAHIEQWIDFSSLEIDANMLKWF-------A 114

  Fly   150 PK---APFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKLDIQLRRHELASSREEFQKVL 211
            |:   |||..|..::.:                     :||:..|: .|..| |||:        
plant   115 PRMGYAPFSAPAEEAAI---------------------SALKRGLE-ALNTH-LASN-------- 148

  Fly   212 DAVRHFLLYVEQELTAQAPRVEWLTGDELSVADI------SLGL--LLHRLYQLGF---ENQFWT 265
                                 .:|.|..:::|||      :||.  ::.:.:...|   |..|||
plant   149 ---------------------TFLVGHSVTLADIVTICNLNLGFATVMTKKFTSAFPHVERYFWT 192

  Fly   266 FGKLPQVEAYFLRFRQRES 284
            ....|:.:......:|.|:
plant   193 MVNQPEFKKVLGDAKQTEA 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 66/279 (24%)
GST_C_family 178..285 CDD:470672 23/118 (19%)
AT1G57720NP_176084.1 GST_N_EF1Bgamma 6..77 CDD:239342 26/76 (34%)
GST_C_EF1Bgamma_like 90..210 CDD:198290 32/178 (18%)
EF1G 255..360 CDD:459888
Blue background indicates that the domain is not in the aligned region.

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