DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and AT1G09640

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_563848.1 Gene:AT1G09640 / 837491 AraportID:AT1G09640 Length:414 Species:Arabidopsis thaliana


Alignment Length:203 Identity:38/203 - (18%)
Similarity:60/203 - (29%) Gaps:96/203 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ETSTYRDLHLPSL-------------------IIGGSFATVAIC----------LSLYSILQHLR 40
            ||||     ||||                   .:.|..:|.:.|          |.|:..::|  
plant   706 ETST-----LPSLSSCRLCEEKYHQACINQDGTVPGERSTDSFCGKYCQELFEELQLFIGVKH-- 763

  Fly    41 FYTNPAEQKWIVSVLFMVPVYATESIIS---LSNSKFSLPCDILRNCYEAFA------------L 90
              ..|....|.....|.:|....:..||   ..|:|.::...::..|:....            :
plant   764 --PLPEGFSWSFLRRFELPSEVADCDISEKIAYNAKMAVAFSVMDECFSPLVDHRSGVNLLQNIV 826

  Fly    91 YSFG---------SYLVACL--GGE--------------------------------RRVVEYLE 112
            |:||         |:|.|.|  |.|                                ||:::.:|
plant   827 YNFGSNFHRLDFSSFLTAVLERGDEIIAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIE 891

  Fly   113 NESKKPLL 120
            :....|||
plant   892 SVGPPPLL 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 27/149 (18%)
GST_C_family 178..285 CDD:470672
AT1G09640NP_563848.1 GST_N_EF1Bgamma 3..77 CDD:239342
GST_C_EF1Bgamma_like 90..210 CDD:198290
EF1G 255..361 CDD:459888
Blue background indicates that the domain is not in the aligned region.

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