DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and gdap1l1

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001072239.1 Gene:gdap1l1 / 779687 XenbaseID:XB-GENE-950543 Length:364 Species:Xenopus tropicalis


Alignment Length:348 Identity:91/348 - (26%)
Similarity:152/348 - (43%) Gaps:49/348 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TKEIEALPPTLQDFKAPDLPANKP--VLFFHPYNFHAQKVLMVFYEKKIDFFPYVVDLCNGEQYS 67
            :||:|..|.:..       |.:|.  ||:....:|.:||:.:|..||........|.|...|...
 Frog    27 SKELEDNPESFS-------PKSKDTLVLYHWTQSFSSQKIRLVIAEKGFPCDERDVSLPLTEHKE 84

  Fly    68 NWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFRGD--RSLKPAHNSKEFDQMLIFEQAMAR 130
            .||:.||...:|||:..|..:|.....||:|:|:.|.|:  ..|.|...:....::|.:.:.:.:
 Frog    85 PWFMRLNLGEEVPVVIHGDNIISDYNQIIDYIENNFVGELIPKLIPETETIFHSRVLQYREILDK 149

  Fly   131 LPVGTLSLGSFIHDDL---KLVPKAPFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKLD 192
            ||:...:.|..:|.:|   .::||.. ...:|:. |.|....|..|.|...:......:.|.||.
 Frog   150 LPMDAYTHGCILHPELTTDSMIPKYA-TAEIRRH-LANASTELTKLDHEEPQLMEPYLSKQKKLM 212

  Fly   193 IQLRRHELASSREEFQKVLDAVRHFLLYVEQELTAQAPRVE------WLTGDELSVADISLGLLL 251
            .::..|:   :.....|:|..:...|..:|.||..:....|      ||.|...::||:.||..|
 Frog   213 AKILEHD---NVNYLTKILIQLSMVLDQIEAELEKRKLEYEGQKCELWLCGHIFTLADVLLGATL 274

  Fly   252 HRLYQLGFENQFWTFGKLPQVEAYFLRFRQRESFHR------------LQPSNFAILREMWTRTP 304
            |||..||...::|..|..|.::.:|.|.::|.:|.:            :.|:.|.:::    |.|
 Frog   275 HRLKFLGLSKKYWEDGSRPNLQLFFDRIQKRYAFRKVLGDIHTTLLSAVLPNAFRLVK----RKP 335

  Fly   305 GNYKLGAGAGFL-----GMAMFA 322
            .::   .||.||     ||..||
 Frog   336 PSF---FGASFLMGSLGGMGYFA 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 74/289 (26%)
GST_C_family 178..285 CDD:470672 30/112 (27%)
gdap1l1NP_001072239.1 Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold 45..117 CDD:469754 23/71 (32%)
GST_C_family 198..308 CDD:470672 30/112 (27%)

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