DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and Gstt4

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001103145.1 Gene:Gstt4 / 686922 RGDID:1591294 Length:240 Species:Rattus norvegicus


Alignment Length:234 Identity:47/234 - (20%)
Similarity:84/234 - (35%) Gaps:59/234 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KVLMVFYEKK-IDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFR 104
            :.:.:|..|. |.|....|||..|..:|..::.:||...||.|:||..::..|..|:.|:..|:.
  Rat    15 RAVYIFARKNGIPFDFQFVDLLKGHHHSKEYIEINPLRKVPSLRDGKFILSESVAILCYLCRKYS 79

  Fly   105 GDRSLKP--AHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDLKLVPKAPFIGPVRQSCLKNNE 167
            ......|  .|.....|:.:.::....::|:..:..       :||:  .|.|         ..|
  Rat    80 APSHWYPPDLHMRARVDEFMAWQHTAIQVPMSKILW-------IKLI--IPMI---------TGE 126

  Fly   168 KVLDLLRHSVDEQATKKAALQHKLDIQLRRHELASSREEFQKVLDAVRHFLLYVEQELTAQAPRV 232
            :|                                 ..|...|.||.|...:...|::.....   
  Rat   127 EV---------------------------------PTERLDKTLDEVNKNIKQFEEKFLQDK--- 155

  Fly   233 EWLTGDELSVADISLGLLLHRLYQLGFENQFWTFGKLPQ 271
            .::|||.:|:||  |..|:..:..:|..:..:...||.:
  Rat   156 LFITGDHISLAD--LVALVEMMQPMGTNHNVFISSKLAE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 47/234 (20%)
GST_C_family 178..285 CDD:470672 17/94 (18%)
Gstt4NP_001103145.1 GST_N_Theta 3..78 CDD:239348 19/62 (31%)
GST_C_Theta 92..216 CDD:198292 25/157 (16%)

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