DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and gstr

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001038525.1 Gene:gstr / 564619 ZFINID:ZDB-GENE-090507-1 Length:226 Species:Danio rerio


Alignment Length:140 Identity:33/140 - (23%)
Similarity:65/140 - (46%) Gaps:18/140 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KVLMVFYEKKIDFFPY-VVDLCNGEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFR 104
            ::::...||::..:.: ::.....|..|.....|||:..:|..:.|.:|:..|.....|:||.|:
Zfish    18 RLMIALEEKQLQGYKHKLLSFDKKEHQSPEVKALNPRAQLPTFKHGEIVVNESFAACLYLESVFK 82

  Fly   105 --GDRSL--KPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDLKLVPKAPFIGPVRQSCLK- 164
              |.|.:  .||..:..:.:|  ||....:..:..::...:      |||:    |...:|.|| 
Zfish    83 SQGTRLIPDNPAEMALVYQRM--FETENLQQKMYEVAFYDW------LVPE----GERLESALKR 135

  Fly   165 NNEKVLDLLR 174
            |.||:::.|:
Zfish   136 NKEKLIEELK 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 33/140 (24%)
GST_C_family 178..285 CDD:470672
gstrNP_001038525.1 GstA 5..212 CDD:440390 33/140 (24%)
Blue background indicates that the domain is not in the aligned region.

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