DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and gdap1l1

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_687373.2 Gene:gdap1l1 / 562163 ZFINID:ZDB-GENE-080812-2 Length:367 Species:Danio rerio


Alignment Length:343 Identity:95/343 - (27%)
Similarity:155/343 - (45%) Gaps:44/343 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 EALPPTLQDFKAPDLPANKP--VLFFHPYNFHAQKVLMVFYEKKIDFFPYVVDLCNGEQYSNWFL 71
            |:..||:.:.|    |.:|.  ||:....:|.:|||.:|..||.:......|.|...||...||:
Zfish    31 ESHEPTIHEHK----PYSKDRLVLYHWTQSFSSQKVRLVINEKGLLCEERDVSLPLTEQKEPWFM 91

  Fly    72 NLNPKGDVPVLQDGALVIPSSTHIINYVESKFRGD--RSLKPAHNSKEFDQMLIFEQAMARLPVG 134
            .||...:|||...|..::.....||:|:|:.|.||  ..|.|...:..:.::..:.:.:..||:.
Zfish    92 RLNLGEEVPVFIHGDTIVSDYNQIIDYIETNFVGDTVAQLIPDEGTPMYARVQQYRELLDELPMD 156

  Fly   135 TLSLGSFIHDDL---KLVPKAPFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKLDIQLR 196
            ..:.|..:|.:|   .::||.. ...:|:. |.|....|..|.|...:......:.|.||..::.
Zfish   157 AYTHGCILHPELTTDSMIPKYA-TAEIRRH-LANAASELMKLDHEEPQLTEPYLSKQKKLMAKIL 219

  Fly   197 RHE----LASSREEFQKVLDAVRHFLLYVEQELTAQAPRVE-WLTGDELSVADISLGLLLHRLYQ 256
            .|:    |.....|...|||.|...|  .:::|..|..:.| ||.|...::|||.||..||||..
Zfish   220 DHDNVNYLKKILGELAMVLDQVEAEL--EKRKLEYQGQKCELWLCGPTFTLADICLGATLHRLKF 282

  Fly   257 LGFENQFWTFGKLPQVEAYFLRFRQRESFHR------------LQPSNFAILREMWTRTPGNYKL 309
            ||...::|..|..|.::::|.|.::|.:|.:            :.|:.|.::::   :.|..:  
Zfish   283 LGLSRKYWEDGSRPNLQSFFERVQKRYAFRKVLGDIHTTLLSAVLPNAFRMVKK---KPPSFF-- 342

  Fly   310 GAGAGFL-----GMAMFA 322
              ||.||     ||..||
Zfish   343 --GASFLMGSLGGMGYFA 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 79/288 (27%)
GST_C_family 178..285 CDD:470672 34/111 (31%)
gdap1l1XP_687373.2 None

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