DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and gdap1

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001018511.1 Gene:gdap1 / 553702 ZFINID:ZDB-GENE-050522-424 Length:362 Species:Danio rerio


Alignment Length:350 Identity:93/350 - (26%)
Similarity:156/350 - (44%) Gaps:31/350 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SEQTKEIEALPPTLQD----FKAPDLPANKPVLFFHPYNFHAQKVLMVFYEKKIDFFPYVVDLCN 62
            |:..||| .:....||    .::....|:|.:|:....:|.:|||.:...||.:....|.|.|..
Zfish    11 SQDEKEI-LIKKDAQDSGEIVESTKTKASKLILYHWTQSFSSQKVRLAIAEKGLQCEDYDVSLPL 74

  Fly    63 GEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFRGDRSLK--PAHNSKEFDQMLIFE 125
            .|....||:.|||.|:||||.....||...|.|::|:|..|..:::.|  |...|..:.::..:.
Zfish    75 SEHNEPWFMRLNPTGEVPVLVHDNHVICDPTQIMDYLEQNFCDEQTPKLIPEEGSTYYHRVQHYR 139

  Fly   126 QAMARLPVGTLSLGSFIHDDLKLVPKAPFIGPVR-QSCLKNNEKVLDLLRHSVDEQATKKA--AL 187
            :.:..|.:...:.|..:|.::.:....|...... ::.:.|.|.  :|.:.:|:....|.|  |.
Zfish   140 ELLDSLQMDAYTHGCILHPEITVDSHIPAYATTHIRTQIGNTES--ELKKLAVENPDLKDAYIAK 202

  Fly   188 QHKLDIQLRRHE----LASSREEFQKVLDAVRHFLLYVEQELTAQAPRVEWLTGDELSVADISLG 248
            |.:|..:|..|:    |....:|.:.|||.|...|....:|...:..:..||.||..|:||:||.
Zfish   203 QRRLKSKLFDHDNMKYLKKLLDELENVLDQVETELQRRSEETPEEGSQQAWLCGDFFSIADVSLA 267

  Fly   249 LLLHRLYQLGFENQFWTFGKLPQVEAYFLRFRQRESFHR------------LQPSNFAILREMWT 301
            :.||||..||...::|..|....:|.|:.|...|.:|.|            :.|:.|.:.::   
Zfish   268 VTLHRLKFLGLSRRYWGNGMRVNLETYYERVLDRPTFRRVLGHVNNILISAVLPTAFRVAKK--- 329

  Fly   302 RTPGNYKLGAGAGFLGMAMFAAFAH 326
            :.|.........|.:|.|.:.||.:
Zfish   330 KAPAFVGATLLVGLIGGATYLAFIY 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 79/287 (28%)
GST_C_family 178..285 CDD:470672 36/112 (32%)
gdap1NP_001018511.1 GST_N_GDAP1 40..112 CDD:239350 26/71 (37%)
GST_C_family 193..304 CDD:470672 36/110 (33%)

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