DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and Gstt3

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_063135537.1 Gene:Gstt3 / 499422 RGDID:1562732 Length:274 Species:Rattus norvegicus


Alignment Length:234 Identity:51/234 - (21%)
Similarity:82/234 - (35%) Gaps:94/234 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KVLMVFYEKK-IDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFR 104
            :.:.:|.:|. |.|....::|..|:.|::.|..:||...||.|:||..|:..|..|:.|:..|::
  Rat    72 RAVYIFAKKNGIPFQLRTIELLKGQHYTDAFAQVNPLRKVPALKDGDFVLAESVAILLYLSRKYK 136

  Fly   105 GDRSLKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDLKLVPKAPFIGPVRQSCLKNNEKV 169
            .     |.|                           :...||:                      
  Rat   137 A-----PDH---------------------------WYPQDLQ---------------------- 147

  Fly   170 LDLLRHSVDEQATKKAALQHKLDIQLRRHELASSREEFQKVLDAVRHFLLYVEQ----------- 223
               .|..|||.    .|.||   ..||.   ..||..:||::     |.:::.|           
  Rat   148 ---TRARVDEY----LAWQH---TALRS---CCSRAMWQKMM-----FPVFLGQPVPPERLASTL 194

  Fly   224 -ELTAQAPRVE--------WLTGDELSVAD-ISLGLLLH 252
             ||......:|        :|||..:|||| :::..|:|
  Rat   195 AELDGCLQMLEDKFLQNKAFLTGPHISVADLVAITELMH 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 51/234 (22%)
GST_C_family 178..285 CDD:470672 25/96 (26%)
Gstt3XP_063135537.1 None

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