DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and Gdap1l1

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_001101268.1 Gene:Gdap1l1 / 311616 RGDID:1304960 Length:366 Species:Rattus norvegicus


Alignment Length:353 Identity:96/353 - (27%)
Similarity:156/353 - (44%) Gaps:53/353 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EIEALPPTLQDFKAPDL-----PANKP----VLFFHPYNFHAQKVLMVFYEKKIDFFPYVVDLCN 62
            |.:|..|.    :|||.     ||:.|    ||:....:|.:|||.:|..||.:......|.|..
  Rat    21 ESDAAKPV----EAPDAPEAASPAHWPKESLVLYHWTQSFSSQKVRLVIAEKGLSCEERDVSLPQ 81

  Fly    63 GEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFRGDR--SLKPAHNSKEFDQMLIFE 125
            .|....||:.||...:|||:.....:|.....||:|||..|.|:.  :|.|...|.:..::|.:.
  Rat    82 SEHKEPWFMRLNLGEEVPVIIHRDNIISDYDQIIDYVERTFTGEHVVALMPEAGSPQHARVLQYR 146

  Fly   126 QAMARLPVGTLSLGSFIHDDL---KLVPKAPFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAAL 187
            :.:..||:...:.|..:|.:|   .::||.. ...:|:. |.|....|..|.|...:.:....:.
  Rat   147 ELLDALPMDAYTHGCILHPELTTDSMIPKYA-TAEIRRH-LANATTDLMKLDHEEPQLSEPYLSK 209

  Fly   188 QHKLDIQLRRHELASSREEFQKVLDAVRHFLLYVEQELTAQAPRVE------WLTGDELSVADIS 246
            |.||..::..|:...   ..:|:|..:...|..:|.||..:....|      ||.|...::||:.
  Rat   210 QKKLMAKILEHDDVG---YLKKILGELAMVLDQIEAELEKRKLENEGQTCELWLCGCAFTLADVL 271

  Fly   247 LGLLLHRLYQLGFENQFWTFGKLPQVEAYFLRFRQRESFHRLQ------------PSNFAILREM 299
            ||..||||..||...::|..|..|.::::|.|.::|.:|.::.            |:.|.:::  
  Rat   272 LGATLHRLKFLGLSKKYWEDGSRPNLQSFFERVQRRLAFRKVLGDIHTTLLSAVIPNAFRLVK-- 334

  Fly   300 WTRTPGNYKLGAGAGFL-----GMAMFA 322
              |.|.::   .||.||     ||..||
  Rat   335 --RKPPSF---FGASFLMGSLGGMGYFA 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 76/289 (26%)
GST_C_family 178..285 CDD:470672 30/112 (27%)
Gdap1l1NP_001101268.1 GST_N_GDAP1 47..119 CDD:239350 23/71 (32%)
GST_C_family 200..310 CDD:470672 30/112 (27%)

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