DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and Gstt2

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_036928.1 Gene:Gstt2 / 29487 RGDID:69362 Length:244 Species:Rattus norvegicus


Alignment Length:219 Identity:56/219 - (25%)
Similarity:87/219 - (39%) Gaps:47/219 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KVLMVFYEKK-IDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFR 104
            :.:.:|.:|. |.|....|||..|:..|..|..:|....||||:||:.|:..||.|:.|:.||::
  Rat    15 RAVYIFAKKNGIPFQLRTVDLLKGQHLSEQFSQVNCLKKVPVLKDGSFVLTESTAILIYLSSKYQ 79

  Fly   105 GDRSLKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDL-----------------KLVPKA 152
            ......||.           .||.|:           :|:.|                 |::  .
  Rat    80 VADHWYPAD-----------LQARAQ-----------VHEYLGWHADNIRGTFGVLLWTKVL--G 120

  Fly   153 PFIG-PVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKLDIQLRRHELASSREEFQKVLDAVRH 216
            |.|| .|.:..::.|...:.|....::::..:..|......:.|.  :|.|..|..|.|  |:..
  Rat   121 PLIGVQVPEEKVERNRNSMVLALQRLEDKFLRDRAFIAGQQVTLA--DLMSLEELIQPV--ALGC 181

  Fly   217 FLLYVEQELTAQAPRVEWLTGDEL 240
            .|.....:|||...|||...|.||
  Rat   182 NLFEGRPQLTAWRERVEAFLGAEL 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 56/219 (26%)
GST_C_family 178..285 CDD:470672 18/63 (29%)
Gstt2NP_036928.1 GST_N_Theta 3..78 CDD:239348 23/62 (37%)
GST_C_Theta 91..216 CDD:198292 29/132 (22%)

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