DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and Gstt1

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:NP_445745.1 Gene:Gstt1 / 25260 RGDID:2765 Length:240 Species:Rattus norvegicus


Alignment Length:254 Identity:59/254 - (23%)
Similarity:102/254 - (40%) Gaps:87/254 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 KVLMVFYEK-KIDFFPYVVDLCNGEQYSNWFLNLNPKGDVPVLQDGALVIPSSTHIINYVESKFR 104
            :.:.:|.:| .|.|..:.|:|..||..|:.|..:||...||.::||...:..|..|:.|:..|::
  Rat    15 RAIYIFAKKNNIPFQMHTVELRKGEHLSDAFAQVNPMKKVPAMKDGGFTLCESVAILLYLAHKYK 79

  Fly   105 GDRSLKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDLKLVPKAPFIGPVRQSCLKNNEKV 169
                 .|.|   .:.|.|   ||.||:.    ...::.|..|            |:|||:     
  Rat    80 -----VPDH---WYPQDL---QARARVD----EYLAWQHTTL------------RRSCLR----- 112

  Fly   170 LDLLRHSVDEQATKKAALQHK------LDIQLRRHELASSREEFQ---KVLDAVRHFLLYVEQEL 225
                            .|.||      |..|:|...||::..:..   :||:         :|.|
  Rat   113 ----------------TLWHKVMFPVFLGEQIRPEMLAATLADLDVNVQVLE---------DQFL 152

  Fly   226 TAQAPRVEWLTGDELSVAD-ISLGLLLHRLYQLG-----FENQFWTFGKLPQVEAYFLR 278
            ..:    ::|.|..:|:|| :::..|:|   .:|     ||.:       |::.|::.|
  Rat   153 QDK----DFLVGPHISLADVVAITELMH---PVGGGCPVFEGR-------PRLAAWYRR 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 59/254 (23%)
GST_C_family 178..285 CDD:470672 25/116 (22%)
Gstt1NP_445745.1 GST_N_Theta 3..78 CDD:239348 19/62 (31%)
GST_C_Theta 91..217 CDD:198292 34/167 (20%)

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