DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and eEF1gamma

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_316859.4 Gene:eEF1gamma / 1277399 VectorBaseID:AGAMI1_013749 Length:427 Species:Anopheles gambiae


Alignment Length:266 Identity:59/266 - (22%)
Similarity:86/266 - (32%) Gaps:93/266 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 LFFHPYNFHAQKVLMVFYEKKIDFFPYVV--DLCNGE-QYSNWFLNLNPKGDVPVLQ--DGALVI 89
            |:.:|.||.|.|||:.   .:....|..|  |...|| ..|..||...|.|.||..:  ||..:.
Mosquito     5 LYTYPENFRAYKVLIA---AQYSGTPVKVAADFVFGETNCSEPFLQKFPSGKVPAYETKDGKYLT 66

  Fly    90 PSSTHIINYVESKFRGDRSLKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHDDLKLVPKA-- 152
            .|:.........:.||......|    |....|.|.                   |..|:|..  
Mosquito    67 ESNAIAYYVANEQLRGANDFHRA----EVQSFLSFA-------------------DNVLLPAVQG 108

  Fly   153 ---PFIGPVRQSCLKNNEKVLDLLRHSVDEQATKKAALQHKLDIQLRRHELASSREEFQKVLDAV 214
               |.||.|..:  |||                                 :..::||.::.|.|:
Mosquito   109 WTFPMIGIVPYN--KNN---------------------------------VERAKEELRRGLAAL 138

  Fly   215 RHFLLYVEQELTAQAPRVEWLTGDELSVADISLGLLLHRLYQ----------LGFENQ-FWTFGK 268
            ...||           :..:|.|:.:::||:.:...|...|:          .|..|: |.|...
Mosquito   139 NSRLL-----------KQTYLVGERITLADVVVFATLLHAYEYVLDPAFRAPFGAVNRWFTTLMN 192

  Fly   269 LPQVEA 274
            .|||:|
Mosquito   193 QPQVQA 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 59/266 (22%)
GST_C_family 178..285 CDD:470672 20/108 (19%)
eEF1gammaXP_316859.4 GST_N_EF1Bgamma 3..78 CDD:239342 23/75 (31%)
GST_C_EF1Bgamma_like 88..209 CDD:198290 34/180 (19%)
EF1G 270..372 CDD:459888
Blue background indicates that the domain is not in the aligned region.

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