DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gdap1 and gdap1

DIOPT Version :10

Sequence 1:NP_647945.1 Gene:Gdap1 / 38597 FlyBaseID:FBgn0035587 Length:327 Species:Drosophila melanogaster
Sequence 2:XP_002937122.2 Gene:gdap1 / 100490264 XenbaseID:XB-GENE-978242 Length:350 Species:Xenopus tropicalis


Alignment Length:324 Identity:98/324 - (30%)
Similarity:154/324 - (47%) Gaps:32/324 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 APDLPA---NKPVLFFHPYNFHAQKVLMVFYEKKIDFFPYVVDLCNGEQYSNWFLNLNPKGDVPV 81
            ||..||   .|.:|:...::|.:|||.:|..||.:....:.|.|...|....||:.|||.|:|||
 Frog     8 APAAPAGTEGKLILYHWTHSFSSQKVRLVIAEKSLKCEEHDVSLPLSEHNEPWFMRLNPSGEVPV 72

  Fly    82 LQDGALVIPSSTHIINYVESKFRGDRS--LKPAHNSKEFDQMLIFEQAMARLPVGTLSLGSFIHD 144
            |..|..:|..:|.|.:|:|..|..:::  |.|...|..:.::..:.:.:..||:...:.|..:|.
 Frog    73 LVHGENIICEATQITDYLEQTFIDEKTPRLIPEEGSMYYPRVQHYRELLDSLPMDAYTHGCILHP 137

  Fly   145 DLKLVPKAPFIGPVR-QSCLKNNEKVLDLLRHSVDEQATKKAALQHKLDIQLRRHE----LASSR 204
            :|.:....|.....| ::.:.:.|..|..|.....:......|.|.:|..:|:.|:    |....
 Frog   138 ELTVDSMIPAYATSRIRTQIGSTESELKKLAQENPDLEDAYIAKQKRLKTKLQDHDNIKFLKKIL 202

  Fly   205 EEFQKVLDAVRHFLLYVEQELTAQAPRVEWLTGDELSVADISLGLLLHRLYQLGFENQFWTFGKL 269
            ||.:||||.|...|....:| |.:.....||.|...|:||:||.:.||||..|||..:.|..||.
 Frog   203 EELEKVLDQVETELQRRNEE-TPEEGSESWLCGQFFSLADVSLAVTLHRLRFLGFARRNWGNGKR 266

  Fly   270 PQVEAYFLRFRQRESFHR------------LQPSNFAILREMWTRTP----GNYKLG--AGAGF 315
            |.:|||:.|..||::|:|            :.|:.|.:.::   |.|    ....:|  ||||:
 Frog   267 PNLEAYYERILQRKTFNRVLGNVNNILISAVLPTAFRVAKK---RAPTILGSTLMVGLLAGAGY 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gdap1NP_647945.1 GstA 30..297 CDD:440390 86/285 (30%)
GST_C_family 178..285 CDD:470672 41/110 (37%)
gdap1XP_002937122.2 GST_N_GDAP1 19..91 CDD:239350 26/71 (37%)
GST_C_GDAP1 172..282 CDD:198336 41/110 (37%)

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