DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fitm and fitm1

DIOPT Version :10

Sequence 1:NP_729053.2 Gene:Fitm / 38596 FlyBaseID:FBgn0035586 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001338596.1 Gene:fitm1 / 792443 ZFINID:ZDB-GENE-181219-1 Length:291 Species:Danio rerio


Alignment Length:284 Identity:53/284 - (18%)
Similarity:98/284 - (34%) Gaps:76/284 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 TDLKVALYLGSLF---------VISVIGDFVPF---PKTYFARSDNLFNQYFVKIGWGWTLLFVV 181
            :||...:....||         |:.:.|..:.|   ..:.|...::...:.|::..:|||.:|..
Zfish    22 SDLTAGILAHRLFRQHFHLLLSVLVLFGPLLSFWVSKYSIFCNKNHYLYRLFLQSCFGWTCIFGG 86

  Fly   182 PFLVLSAYTITCGDHKRMLRHHFPRIVIATFFWFFWTKLFNVVENSYGRC--------------- 231
            .|:.|.:::|: ......|||..| ..::...|.....|...:.::.|.|               
Zfish    87 SFVFLLSFSIS-NSILHSLRHLLP-FAVSGSLWTLLRLLLTFLVDASGSCFEPLISPNDAHRNPE 149

  Fly   232 -----------TTKGYATKSSCLKAGHLWKGFDISGHAFILIHSSLVLIEEARPIIRWETIKEHI 285
                       ..:|..:|.:|||.|..|:|.::|....||....|:|.||..  :.|..|.   
Zfish   150 ELLNFKEGPLLLLRGVESKEACLKGGLKWQGCEVSHEILILTFCCLLLSEEIS--VFWSFIG--- 209

  Fly   286 RNERHNRSTAENSGTNPLRTLNEEQMRSLQFLYKRLTPIIRTLFIGMAALQLLWDIMLVGTMLYY 350
                                           ..|.|...:|.:|:....|..||..:::..:.::
Zfish   210 -------------------------------FGKPLGVPLRIIFMLCVFLMSLWMFLILCLLAHF 243

  Fly   351 HRMIEKVISGIIAILTWYFTYRFW 374
            .....:::.|.:..|.|...|:.|
Zfish   244 PLFPSQLVGGALGYLGWKGLYKGW 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FitmNP_729053.2 Scs3p 156..371 CDD:402051 44/240 (18%)
fitm1NP_001338596.1 None

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