DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fitm and fitm-2

DIOPT Version :9

Sequence 1:NP_729053.2 Gene:Fitm / 38596 FlyBaseID:FBgn0035586 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_001021865.1 Gene:fitm-2 / 3565961 WormBaseID:WBGene00044094 Length:283 Species:Caenorhabditis elegans


Alignment Length:292 Identity:86/292 - (29%)
Similarity:139/292 - (47%) Gaps:39/292 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 TRSEARGTRPTAAPTSIREILVMGVIHLCKKTIFFNTDLKVAL-YLGSLFVISVIGDFVPFPKTY 156
            ||:::...|| |:|.|... ..:|:.....:.|.|....|||| ||..:.|:|.|...:....||
 Worm     8 TRADSTTKRP-ASPNSTPN-AALGIFVAIARQILFIDARKVALFYLAFVTVLSFIESRIELDSTY 70

  Fly   157 F-ARSDNLFNQYFVKIGWGWTLLFVVPFLVLSAYTITCGDHKRMLRHHFP-----RIVIATFFWF 215
            : .:..::.|||.||:||.|||:.|.||:..|:..     |.|..|.. |     |:.:.|..|:
 Worm    71 YLVQKHSVLNQYGVKMGWFWTLVIVGPFIWFSSKA-----HNRRDRDQ-PIVDVCRLGVGTACWY 129

  Fly   216 FWTKLFNVVENSYGRCTTKGYATKSSCLKAGHLW-KGFDISGHAFILIHSSLVLIEEARPIIRWE 279
            |..:.|:.|......|......|::.|.:...:| .|:|||||.|::|:|.|::.|||.....::
 Worm   130 FSVQFFHKVLALTSMCDKGRTLTRAQCSEKEGVWTPGYDISGHCFLMIYSILIITEEAIAYRHYQ 194

  Fly   280 TIKEHIRNERHNRSTAENSGTNPLRTLNEEQMRSLQFLYKRLTPIIRTLFIGMAALQLLWDIMLV 344
            .:.:.:.....:|               ||        :.|||..|:..|:.|..|...|...::
 Worm   195 QVTDAVHQMDGDR---------------EE--------HDRLTRCIQYFFVAMLFLHAFWFKQII 236

  Fly   345 GTMLYYHRMIEKVISGIIAILTWYFTYRFWYP 376
            .::||||..||:::..:.|::.|:.|||..||
 Worm   237 ISVLYYHIFIEEILGAVAAVVCWFVTYRMLYP 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FitmNP_729053.2 Scs3p 157..371 CDD:287263 60/220 (27%)
fitm-2NP_001021865.1 Scs3p 75..263 CDD:287263 60/216 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165774
Domainoid 1 1.000 67 1.000 Domainoid score I6441
eggNOG 1 0.900 - - E1_KOG3750
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H35254
Inparanoid 1 1.050 121 1.000 Inparanoid score I3329
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG29175
OrthoDB 1 1.010 - - D1621925at2759
OrthoFinder 1 1.000 - - FOG0001836
OrthoInspector 1 1.000 - - oto20243
orthoMCL 1 0.900 - - OOG6_105238
Panther 1 1.100 - - LDO PTHR23129
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1295
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.840

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