DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fitm and SPBC543.08

DIOPT Version :9

Sequence 1:NP_729053.2 Gene:Fitm / 38596 FlyBaseID:FBgn0035586 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_596796.1 Gene:SPBC543.08 / 2540872 PomBaseID:SPBC543.08 Length:250 Species:Schizosaccharomyces pombe


Alignment Length:276 Identity:76/276 - (27%)
Similarity:102/276 - (36%) Gaps:76/276 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VIHLCKKTIFFNTDLKVALYLGSLFVISVIGDFVPFPKTYFARSDNLFNQYFVKIGWGWTLLFVV 181
            ::.|.:|.|.........|.|||::.|.|....:   .:||..|.||.|..|||.||.||.|   
pombe    16 ILKLRRKDILLFEIYATTLLLGSIYSIYVDKWSI---TSYFGNSKNLINLIFVKRGWFWTSL--- 74

  Fly   182 PFLVLSAYTITCGDHKR-MLRHHF-PRIVIATFFWFFWTKLF---NVVENSY----GRCTTKGY- 236
                  .|.....|.|| .:...| .|.::||.:|.|.|:.|   .:::.::    |.|  |.: 
pombe    75 ------VYFYHAWDQKRNKIDFKFISRYIVATLWWMFVTQWFIGPGLIDRTFALSGGSC--KNFD 131

  Fly   237 --------ATKSSCLKAGHLWK-GFDISGHAFILIHSSLVLIEEARPIIRWETIKEHIRNERHNR 292
                    .|.|:|......|. |.|:|||.|:|.||||.::.|                   |.
pombe   132 GDSSVFIPLTASTCKGLNGSWSGGHDLSGHVFLLTHSSLFMLSE-------------------NF 177

  Fly   293 STAENSGTNPLRTLNEEQMRSLQFLYKRLTPIIRTLFIGMAALQLLWDIMLVGTMLYYHRMIEKV 357
            |...|:|.....|                    :.||    .|..||..||..|..:||...||.
pombe   178 SFILNNGIKATST--------------------KVLF----GLLGLWWWMLFVTASFYHTTFEKC 218

  Fly   358 ISGIIAILTWYFTYRF 373
            ......||.|...|.|
pombe   219 TGFFSGILEWSIVYVF 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FitmNP_729053.2 Scs3p 157..371 CDD:287263 64/232 (28%)
SPBC543.08NP_596796.1 Scs3p 53..232 CDD:287263 64/232 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 58 1.000 Domainoid score I3087
eggNOG 1 0.900 - - E1_KOG3750
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 65 1.000 Inparanoid score I1967
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001836
OrthoInspector 1 1.000 - - oto100619
orthoMCL 1 0.900 - - OOG6_105238
Panther 1 1.100 - - LDO PTHR23129
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1295
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.890

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