DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fitm and fit1

DIOPT Version :10

Sequence 1:NP_729053.2 Gene:Fitm / 38596 FlyBaseID:FBgn0035586 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_596796.1 Gene:fit1 / 2540872 PomBaseID:SPBC543.08 Length:250 Species:Schizosaccharomyces pombe


Alignment Length:276 Identity:76/276 - (27%)
Similarity:102/276 - (36%) Gaps:76/276 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 VIHLCKKTIFFNTDLKVALYLGSLFVISVIGDFVPFPKTYFARSDNLFNQYFVKIGWGWTLLFVV 181
            ::.|.:|.|.........|.|||::.|.|....:   .:||..|.||.|..|||.||.||.|   
pombe    16 ILKLRRKDILLFEIYATTLLLGSIYSIYVDKWSI---TSYFGNSKNLINLIFVKRGWFWTSL--- 74

  Fly   182 PFLVLSAYTITCGDHKR-MLRHHF-PRIVIATFFWFFWTKLF---NVVENSY----GRCTTKGY- 236
                  .|.....|.|| .:...| .|.::||.:|.|.|:.|   .:::.::    |.|  |.: 
pombe    75 ------VYFYHAWDQKRNKIDFKFISRYIVATLWWMFVTQWFIGPGLIDRTFALSGGSC--KNFD 131

  Fly   237 --------ATKSSCLKAGHLWK-GFDISGHAFILIHSSLVLIEEARPIIRWETIKEHIRNERHNR 292
                    .|.|:|......|. |.|:|||.|:|.||||.::.|                   |.
pombe   132 GDSSVFIPLTASTCKGLNGSWSGGHDLSGHVFLLTHSSLFMLSE-------------------NF 177

  Fly   293 STAENSGTNPLRTLNEEQMRSLQFLYKRLTPIIRTLFIGMAALQLLWDIMLVGTMLYYHRMIEKV 357
            |...|:|.....|                    :.||    .|..||..||..|..:||...||.
pombe   178 SFILNNGIKATST--------------------KVLF----GLLGLWWWMLFVTASFYHTTFEKC 218

  Fly   358 ISGIIAILTWYFTYRF 373
            ......||.|...|.|
pombe   219 TGFFSGILEWSIVYVF 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FitmNP_729053.2 Scs3p 156..371 CDD:402051 65/233 (28%)
fit1NP_596796.1 Scs3p 51..232 CDD:402051 65/234 (28%)

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