DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fitm and Fitm2

DIOPT Version :10

Sequence 1:NP_729053.2 Gene:Fitm / 38596 FlyBaseID:FBgn0035586 Length:480 Species:Drosophila melanogaster
Sequence 2:NP_775573.1 Gene:Fitm2 / 228859 MGIID:2444508 Length:262 Species:Mus musculus


Alignment Length:252 Identity:71/252 - (28%)
Similarity:119/252 - (47%) Gaps:48/252 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 SVIGDFVPFPKTYFARSDNLFNQYFVKIGWGWTLLFVVPFLVLSAYTITCGDHKRMLRHHFPRIV 208
            ||:.:..|.|::|.:...|:.|.||||:.|.||:..::||:.|:.|.:| |....:|| ....::
Mouse    36 SVVKELSPLPESYLSNKRNVLNVYFVKLAWAWTVCLLLPFIALTNYHLT-GKTSLVLR-RLSTLL 98

  Fly   209 IATFFWFFWTKLFNVVENSYGRC--------TTKGYATKSSCLKAGHLWKGFDISGHAFILIHSS 265
            :.|..|:..|.||:.:|:..|.|        ..:.:.:|..|.:.|..|.|||||||:|:|...:
Mouse    99 VGTAIWYICTALFSNIEHYTGSCYQSPALEGIRQEHRSKQQCHREGGFWHGFDISGHSFLLTFCA 163

  Fly   266 LVLIEEARPIIRWETIKEHIRNERHNRSTAENSGTNPLRTLNEEQMRSLQFLYKRLTPIIRTLFI 330
            |:::||...:...:|.:.|                                   .|...|.||.:
Mouse   164 LMIVEEMAVLHEVKTDRGH-----------------------------------HLHAAITTLVV 193

  Fly   331 GMAALQLLWDIMLVGTMLYYHRMIEKVISGIIAILTWYFTYRFWYP---TPGLLPEA 384
            .:..|..:|..|.:.|.:|:|.:.:||...:..:|.||.||.:||.   :|||.|::
Mouse   194 ALGFLTFIWVWMFLCTAVYFHDLTQKVFGTMFGLLGWYGTYGYWYLKSFSPGLPPQS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FitmNP_729053.2 Scs3p 156..371 CDD:402051 59/222 (27%)
Fitm2NP_775573.1 Scs3p 47..234 CDD:402051 59/223 (26%)

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