DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlaRS-m and CDC23

DIOPT Version :10

Sequence 1:NP_523932.2 Gene:AlaRS-m / 38595 FlyBaseID:FBgn0028962 Length:1012 Species:Drosophila melanogaster
Sequence 2:NP_004652.2 Gene:CDC23 / 8697 HGNCID:1724 Length:597 Species:Homo sapiens


Alignment Length:130 Identity:25/130 - (19%)
Similarity:50/130 - (38%) Gaps:46/130 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   361 LGEAYPEMAAKQQAVIDLICHEQEVYKNLRE----SSSKAFAEVLMEFPNLDDIDLMECPGFVPA 421
            |...|.|:...::|:        :.|:||.:    .||...:::.:.:.|:.|||..     :..
Human   234 LAHIYTELQLIEEAL--------QKYQNLIDVGFSKSSYIVSQIAVAYHNIRDIDKA-----LSI 285

  Fly   422 YRELQMQRCKFSNNTIPGDFLYKLTDTYGLTE-ESFLKLAELENMN----------CDLERYRAE 475
            :.||:.|                  |.|.:.. ::|..|..:.:|.          |::::||.|
Human   286 FNELRKQ------------------DPYRIENMDTFSNLLYVRSMKSELSYLAHNLCEIDKYRVE 332

  Fly   476  475
            Human   333  332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlaRS-mNP_523932.2 PLN02900 13..1010 CDD:215487 25/130 (19%)
CDC23NP_004652.2 TPR 1 27..63
ANAPC8 45..148 CDD:427675
TPR 2 73..112
TPR 3 114..144
TPR 4 169..200
TPR 172..>401 CDD:440225 25/130 (19%)
TPR 5 229..259 7/32 (22%)
TPR 6 263..293 8/52 (15%)
TPR 7 297..327 4/29 (14%)
TPR 325..>495 CDD:440225 3/8 (38%)
TPR 8 331..361 1/2 (50%)
TPR repeat 331..359 CDD:276809 1/2 (50%)
TPR 9 366..395
TPR repeat 367..393 CDD:276809
TPR repeat 398..428 CDD:276809
TPR 10 400..432
TPR 11 433..466
TPR repeat 433..461 CDD:276809
TPR repeat 467..495 CDD:276809
TPR 12 468..500
TPR repeat 501..536 CDD:276809
TPR 13 504..540
Blue background indicates that the domain is not in the aligned region.

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