DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlaRS-m and AlaRS

DIOPT Version :10

Sequence 1:NP_523932.2 Gene:AlaRS-m / 38595 FlyBaseID:FBgn0028962 Length:1012 Species:Drosophila melanogaster
Sequence 2:NP_523511.2 Gene:AlaRS / 34156 FlyBaseID:FBgn0027094 Length:966 Species:Drosophila melanogaster


Alignment Length:1057 Identity:349/1057 - (33%)
Similarity:520/1057 - (49%) Gaps:153/1057 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RVLTAREIRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPHK---- 70
            ::|||:|:|..:||.|. ...|.:|.||..:|..|||:.|.||||||||.:|||| |.|:.    
  Fly     2 KLLTAKEVRNAYLDFFK-EQKHIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGT-ADPNSEMSK 64

  Fly    71 --RVVNSQKCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSFGDYFKREACAMALELLRGPYNIDP 133
              ||.|:|||:|.|||||||..||.|.|||||||||||||||||||:|.|:.|.|.|.....:..
  Fly    65 WVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRLALPK 129

  Fly   134 GRLYVTYFAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMGATGPCGPCTEIHIDHR 198
            .|||||||.||...|:..||||.::|..||.....|||....|||||||.|||||||:|:|.|. 
  Fly   130 DRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGPCSELHFDR- 193

  Fly   199 PDLG--SVEQRAKLVNAGRSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMGFERLTAVLQNK 261
              :|  ||.:   |||....|:.|:||||||||||.:|||:.|||..|:|.|||||||.:|:|||
  Fly   194 --IGGRSVPE---LVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFERLVSVIQNK 253

  Fly   262 SSNYDTDLFTPIFDGIQQAAKTPVYSGSF----PDGGNAAVLDTSYRILADHARMVTACLADGML 322
            .||||||||.|:||.||.....|.|.|..    .||     :|.:||:||||||.:|..||||..
  Fly   254 RSNYDTDLFVPLFDAIQAGTGAPPYQGRVGADDVDG-----IDMAYRVLADHARTITIALADGGT 313

  Fly   323 PDQNQK---LRRVLRKALN-ISEHVFAHDKLLTQLVPIVVETLGEAYPEMAAKQQAVIDLICHEQ 383
            ||...:   |||:||:|:. .:|.:.|.......||..||:.||:|:||:....|.:||:| :|:
  Fly   314 PDNTGRGYVLRRILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKKDPQHIIDII-NEE 377

  Fly   384 EVYKNLRESSSKAFAEVLMEFPNLDDIDLMECPGFVPAYRELQMQRCKFSN-NTIPGDFLYKLTD 447
            |:          .|.:.|....||             ..|.::    |..| .|||||..::|.|
  Fly   378 EL----------QFLKTLTRGRNL-------------LNRTIE----KLGNQTTIPGDVAWRLYD 415

  Fly   448 TYGLTEESFLKLAELENMNCDLERYRAEVSLAKLKAKGNQRETAGGSLCDLATEQRI-AEAQAML 511
            |||...:....:||.:::..|::.|.|        ||.|....:.|.......|..: ..|.:.|
  Fly   416 TYGFPVDLTQLMAEEKSLKIDMDGYEA--------AKHNSYVLSQGKGASKIEEINLDVHAISQL 472

  Fly   512 TKR-LTPTDNSHKYTYS--FDKESDSYQIPPLKTRVLGMLLNDAEVSR-TQGSRIQQPFTDLISI 572
            .:: :.||:::.||.|.  .|:...:|......::::.:...:..|:. |.|.:        ..|
  Fly   473 QEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQFVNEITSGQK--------AGI 529

  Fly   573 VTAGSNFYYESGGQQSDGGKILVSNHQQPDHPHSLDVIGVKHLNDCVVHICKLSSPTDAFQLAIG 637
            |...:|||.|||||..|.|.::..|    |..:...|..|.:....::||..:..     .|.:|
  Fly   530 VLDKTNFYAESGGQIYDQGALVKVN----DEANEFLVDRVYNRGGYILHIGVVEG-----TLKVG 585

  Fly   638 DEVELQVDAQQRQLNTCHHTATHLLNAAIRSLFKKVTYQVSSSVSSDQCKLEL----GLLGKRIQ 698
            ||:||.:|.::|.|...:|:|||.||..:..:..|.|.|..|.|..::.:.:.    .:..:::.
  Fly   586 DELELHIDVERRWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVS 650

  Fly   699 KTDVQLIEDLINRVICSAAPVEVQLLSAAEVLEQNDITMVPGEVYPEQGLRLV-----------N 752
            ||: ||.::::.:.:    |:..:....|...:...:..|..||||:. :|::           |
  Fly   651 KTE-QLTKEMVYKNV----PIYAKESKLALAKKIRGLRSVFDEVYPDP-VRVISFGVPVDELEQN 709

  Fly   753 VESPELQLSSKELCCGTHATNTSELSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALLRHRV 817
            .:|...:.:|.|.|.|||...:..:..|.|.:.:...:......|:.|..|...||.:......:
  Fly   710 PDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEI 774

  Fly   818 DLLEKQFQTDKLTNATEA---ELQTIRHNMLHTDIKLPYAFKMDTLERITEMLKRIKDSSRTTLK 879
            ..|:.....||....:::   |:..:...:.|..|  ||. |.|.:..:.:.||:..|.....|:
  Fly   775 VRLKATIDNDKSGKDSKSHVKEIVELTEQISHATI--PYV-KKDEMRNLLKGLKKTLDDKERALR 836

  Fly   880 EFVDVEM----RTLLQEKPLDTHPFILHYITSSALVEEI-----------PLQRATKLCPDRPIL 929
            ..|.|.:    :||.:..|           .::.|||::           .|::.....||...:
  Fly   837 AAVSVTVVERAKTLCEANP-----------NATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAM 890

  Fly   930 VISVCDSVVKARC--CVPEKCITEKFNASAWLQSFADTFNGQIAAPKGQNPQAVCNMKGRRVSNL 992
            .:||.....|..|  .||:..:.:...|:.|:|..:.|..|:    .|..|::.      :.|..
  Fly   891 FLSVDADSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGK----GGGKPESA------QASGT 945

  Fly   993 FEEQLEQAMSKAHAYAK 1009
            ..|::::.:..|..:|:
  Fly   946 NYEKVDEIVQLASKFAQ 962

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlaRS-mNP_523932.2 PLN02900 13..1010 CDD:215487 348/1054 (33%)
AlaRSNP_523511.2 PLN02900 5..963 CDD:215487 348/1054 (33%)

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