DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlaRS-m and Aars2

DIOPT Version :10

Sequence 1:NP_523932.2 Gene:AlaRS-m / 38595 FlyBaseID:FBgn0028962 Length:1012 Species:Drosophila melanogaster
Sequence 2:XP_006244575.1 Gene:Aars2 / 301254 RGDID:1310617 Length:1057 Species:Rattus norvegicus


Alignment Length:1114 Identity:365/1114 - (32%)
Similarity:511/1114 - (45%) Gaps:219/1114 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 IRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTA-----AAPHKRVVNSQ 76
            :|..||..|...|||:.|.|:.|.|..||::.||||||||||.:||||.     .|..:||.|||
  Rat    37 VRDAFLSFFRDRHGHRLVPSASVRPRGDPSLLFVNAGMNQFKPIFLGTVDPRSEMAGFRRVANSQ 101

  Fly    77 KCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSF-GDYFKREACAMALELLRGPYNIDPGRLYVTY 140
            ||||.||:||||..||.|..|||||||||||:| |:|||:|||:||.|||...|.|...||:|:|
  Rat   102 KCVRAGGRHNDLEDVGRDLSHHTFFEMLGNWAFGGEYFKKEACSMAWELLTQVYGIPEDRLWVSY 166

  Fly   141 FAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMGATGPCGPCTEIHIDHRPDLGSVE 205
            |:||...|:..|||..:||.|||.||||:|.||..:||||||.|||||||||||.|....:|..:
  Rat   167 FSGDSKTGLDPDLETRDIWLSLGVPASRVLSFGLQENFWEMGDTGPCGPCTEIHYDLAGGMGPPQ 231

  Fly   206 QRAKLVNAGRSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMGFERLTAVLQNKSSNYDTDLF 270
                        |.|||||||:|:.|.||||:..||..|||||||.|||.||||.|.|.||||||
  Rat   232 ------------LVELWNLVFMQHYREADGSLHLLPQQHVDTGMGLERLVAVLQGKHSTYDTDLF 284

  Fly   271 TPIFDGIQQAAKTPVYSG--SFPDGGNAAVLDTSYRILADHARMVTACLADGMLPDQNQK---LR 330
            :|:.|.|.|:.:.|.|||  ...|.|.   :||:||::|||.|.::.|:|||:.|..:..   ||
  Rat   285 SPLLDAIHQSCRVPPYSGRVGAADEGR---IDTAYRVVADHIRTLSVCIADGVSPGMSGAPLVLR 346

  Fly   331 RVLRKALNISEHVF-AHDKLLTQLVPIVVETLGEAYPEMAAKQQAVIDLICHEQEVYKNLRESSS 394
            |:||:|:..|..|. |....|..|||:||.|||.||||:......:.:|:..::..:....:...
  Rat   347 RILRRAVRYSTEVLQAPPGFLGNLVPVVVATLGAAYPELQKNSVKIANLVSEDEAAFLASLQRGR 411

  Fly   395 KAFAEVLMEFPNLDDIDLMECPGFVPAYRELQMQRCKFSNNTIPGDFLYKLTDTYGLTEESFLKL 459
            :.....:   ..|...||.      ||  |:........|..||.|.:..:.:..|:.    |..
  Rat   412 RIIDRTV---KRLGPSDLF------PA--EVAWSLSLSGNLGIPLDLVQLMLEEKGVK----LDT 461

  Fly   460 AELENMNCDLERYRAEVSLAKLKAKGNQRETAGGSLCDLATEQRIAEAQAMLTKRLTPTDNSHKY 524
            |.||.:.....::||:      :|:..|.|    .||     ..:...:.:..:.:..||:|.||
  Rat   462 AGLEQLAQKEAQHRAQ------QAEAAQEE----GLC-----LDVHALEELHRQGIPTTDDSPKY 511

  Fly   525 TYSFDKESDSYQIPPLKTRVLGML--LNDAEVSRTQGSRIQQPFTDLISIVTAGSNFYYESGGQQ 587
            .||.....| |:....:.:||.:.  ...|..|..:|.|        ..::...:|||.|.|||.
  Rat   512 NYSLRPNGD-YEFGLCEAQVLQLYSETGTAVASVGEGQR--------CGLLLDRTNFYAEQGGQA 567

  Fly   588 SDGGKILVSNHQQPDHPHS-LDVIGVKHLNDCVVHICKLSSPTDAFQLAIGDEVELQVDAQQRQL 651
            ||.|.::.:..|....|.: ..|.|...|::.:...|          |.:||.|:|.||...|..
  Rat   568 SDRGYLIRTGQQDVLFPVARAQVCGGFILHEAMAPEC----------LQVGDRVQLYVDKAWRMG 622

  Fly   652 NTCHHTATHLLNAAIRSLFKKVTYQVSSSVSSDQCKLELGLLGKRIQKTDVQL--IEDLINRVIC 714
            ....||||||||.|:|......|.|..|.::.::.:.:   :..:...|..||  :|..:...:.
  Rat   623 CMVKHTATHLLNWALRQTLGPTTEQRGSHLNPERLRFD---VATQTPLTTEQLRTVESYVQEAVG 684

  Fly   715 SAAPV---EVQLLSAAEVLEQNDITMVPG-----EVYPEQGLRLVNVESPELQL----------S 761
            ...||   ||.|...|.         :||     ||||:. :|:|:|..|..|.          :
  Rat   685 QDKPVYMEEVPLAHTAR---------IPGLRSLDEVYPDP-VRVVSVGVPVAQALAPASQAALQT 739

  Fly   762 SKELCCGTHATNTSELSCFCIVNLKQTNRARFAFTAVAGQAAENVLKTAALLRHRV--------- 817
            |.|||||||..:|..:....|:..:|..:......|:.|:.|:...:....|...|         
  Rat   740 SVELCCGTHLLSTGAVGDLVIIGDRQLVKGITRLLAITGEQAQQAREVGQSLSQEVEVASERLSR 804

  Fly   818 ---DLLE-KQFQTD--KLTNATEA---------ELQT---IRHNMLHTDIKLPYAFKMD------ 858
               |||| .:...|  :|...||:         |.||   :.....:|.|:     |::      
  Rat   805 GSRDLLEAHRLSKDIGRLIEFTESAVIPQWQRQEQQTTLKMLQRRANTAIR-----KLEKSQQPR 864

  Fly   859 -TLERITEMLKRIK------DSSRT----------TLKEFVD-------------------VEMR 887
             ..:||.|..:..|      :||||          .|..|::                   :::|
  Rat   865 GPCDRIEEPRQSQKATDATQESSRTRQSPAHHLSSELMAFMERASMGGRGLSGWVSVQKWNIQLR 929

  Fly   888 TLL----------QEKPLDTH---PFILHYITSSALVEEIPLQRATKLC---PDRPILVIS--VC 934
            .|.          .::.|..|   |.|:..:::.:|...:.:.|  :||   |...:|::|  ..
  Rat   930 PLCCSSAPQATEKSQELLKRHSEGPLIVDTVSAQSLSVLVKVVR--QLCKQAPSMSVLLLSPQPT 992

  Fly   935 DSVVKARCCVPEKCITEKFNASAWLQSFADTFNGQIAAPKGQNPQAVCNMKGRRVSNLFEEQLEQ 999
            .||:.|  |...:..|..|.|.||..:......|     |......:....|...      .||.
  Rat   993 GSVLCA--CQVAQGATPTFTAEAWALAVCSHMGG-----KAWGSPVIAQGTGHTA------DLEA 1044

  Fly  1000 AMSKAHAYA 1008
            |:..|.|||
  Rat  1045 ALRTARAYA 1053

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlaRS-mNP_523932.2 PLN02900 13..1010 CDD:215487 365/1114 (33%)
Aars2XP_006244575.1 PLN02900 34..1055 CDD:215487 365/1114 (33%)

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