DRSC/TRiP Functional Genomics Resources

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Protein Alignment AlaRS-m and aars1

DIOPT Version :9

Sequence 1:NP_523932.2 Gene:AlaRS-m / 38595 FlyBaseID:FBgn0028962 Length:1012 Species:Drosophila melanogaster
Sequence 2:XP_017948852.2 Gene:aars1 / 100492308 XenbaseID:XB-GENE-963523 Length:999 Species:Xenopus tropicalis


Alignment Length:1071 Identity:360/1071 - (33%)
Similarity:519/1071 - (48%) Gaps:168/1071 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AKQLQRVLTAREIRKTFLDHFTVNHGHKFVRSSPVVPFCDPTVAFVNAGMNQFKSVFLGTAAAPH 69
            |..::..:||.|||:.|:|.|..| .|.:|.||..||..|||:.|.||||||||.:||.|....|
 Frog    29 ALTMKTCMTASEIRQKFIDFFKEN-AHTYVHSSATVPLDDPTLLFANAGMNQFKPIFLNTIDPSH 92

  Fly    70 -----KRVVNSQKCVRVGGKHNDLSVVGTDGYHHTFFEMLGNWSFGDYFKREACAMALELLRGPY 129
                 .|..|:|||:|.|||||||..||.|.||||||||||:||||||||..||.:||:||...:
 Frog    93 PMAKLNRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKLALDLLTKEF 157

  Fly   130 NIDPGRLYVTYFAGDKVLGIPADLECFEIWRSLGFPASRILPFGCADNFWEMGATGPCGPCTEIH 194
            .||..|||||||.|::..|:..||||.:||.:||.|.|||||....|||||||.|||||||:|||
 Frog   158 GIDIERLYVTYFGGNEAAGLEPDLECKQIWLNLGLPESRILPGSMKDNFWEMGDTGPCGPCSEIH 222

  Fly   195 IDHRPDLGSVEQRAKLVNAGRSDLTELWNLVFIQYNRHADGSISQLPAHHVDTGMGFERLTAVLQ 259
            .|.   :|. ...|.|||....::.|:|||||||:||..||::..||...:|||||.|||.:|||
 Frog   223 FDR---IGG-RDAAHLVNMDDPNVLEIWNLVFIQFNRETDGTLKPLPKKSIDTGMGLERLVSVLQ 283

  Fly   260 NKSSNYDTDLFTPIFDGIQQAAKTPVYSGSF----PDGGNAAVLDTSYRILADHARMVTACLADG 320
            ||.||||||||.|.|:.|::......|:|..    .||     :|.:||:||||||.:|..||||
 Frog   284 NKMSNYDTDLFVPYFEAIEKGTGARPYTGKVGAEDVDG-----IDMAYRVLADHARTITVALADG 343

  Fly   321 MLPDQNQK---LRRVLRKALNISEHVFAHDKL------LTQLVPIVVETLGEAYPEMAAKQQAVI 376
            ..||...:   |||:||:|:.     :||:||      ...||.:||::||.|:||:......|.
 Frog   344 GRPDNTGRGYVLRRILRRAVR-----YAHEKLNASKGFFATLVDVVVQSLGNAFPELKKDPDMVK 403

  Fly   377 DLICHEQEVY-------KNLRESSSKAFAEVLMEFPNLDDIDLMECPGFVPAYRELQMQRCKFSN 434
            |:|..|:..:       :.:.:....:..|                                  :
 Frog   404 DIINEEETQFLKTLNRGRRILDRKINSLGE----------------------------------H 434

  Fly   435 NTIPGDFLYKLTDTYGLTEESFLKLAELENMNCDLERYRAEVSLAKLKAKGNQRETAGGSLCDLA 499
            ..||||..:.|.||||...:....:||...:..|||.:..|...|:||::|  :.|....|..| 
 Frog   435 KVIPGDTAWLLYDTYGFPVDLTSLIAEERGLTLDLESFEEERKAAQLKSQG--KGTGDEDLLML- 496

  Fly   500 TEQRIAEAQAMLTKRLTPTDNSHKYTYSFDKESDSYQIPPLKTRVLG-----MLLNDAEVSRTQG 559
               .|...:.:.::.|.|||:..||.|:.:.:. .|:...|...|..     |.:.:|...:..|
 Frog   497 ---DIYAIEELRSQGLEPTDDLPKYKYTSNADG-VYEFESLIATVKAIRRDKMFVEEASTGQECG 557

  Fly   560 SRIQQPFTDLISIVTAGSNFYYESGGQQSDGGKILVSNHQQPDHPHSLDVIGVKHLNDCVVHICK 624
                        :|...:.||.|.|||..|.| .:|...:..:......|...:.....|:|:..
 Frog   558 ------------LVLDKTCFYAEQGGQTYDEG-YMVKEEESSEDKTEFTVRNTQVRGGYVLHMGT 609

  Fly   625 LSSPTDAFQLAIGDEVELQVDAQQRQLNTCHHTATHLLNAAIRSLFKKVTYQVSSSVSSDQCKLE 689
            |..     .|.:||:|.|.||..:|:....:|||||:||.|:||:..:.. |..|.|:.|:.:.:
 Frog   610 LYG-----HLKVGDQVRLYVDEPKRRPIMSNHTATHILNFALRSVLGEAD-QRGSLVAPDRLRFD 668

  Fly   690 LGLLG----KRIQKTDVQLIEDLI--NRVI----CSAAPVE-VQLLSAAEVLEQNDITMVPGEVY 743
            ....|    :.|:||: ::..|:|  |:|:    ||.|..: :|.|.|           |..|.|
 Frog   669 FTAKGAMSTQEIRKTE-EIANDIIKENKVVYALDCSLAEAKAIQGLRA-----------VFDETY 721

  Fly   744 PEQGLRLVNV-----------ESPELQLSSKELCCGTHATNTSELSCFCIVNLKQTNRARFAFTA 797
            |:. :|:|::           .||...::|.|.|.|||..|:.....|.||..:...:......|
 Frog   722 PDP-VRVVSIGIPVEDLLADPSSPAGSITSVEFCGGTHLQNSGHAGPFIIVTEEAIAKGIRRIVA 785

  Fly   798 VAGQAAENVLKTAALLRHRVDLLEKQFQTDKLTNA-TEAELQTIRHNMLHTDIKLPYAFKMDTLE 861
            |.|..|:..|:....|:..:..|||:.:.....|. .:.|:..:..|:....|.   .::.|.|.
 Frog   786 VTGAEAQKALRRQDALKVNLSDLEKKVKKQNSPNKDVQKEIADLSENLATASIA---QWQKDVLR 847

  Fly   862 RITEMLKRIKDSSRTTLKEFVDVEMRTL-LQEKPLDTHP----FILHY---ITSSALVEEIPLQR 918
            ...:.||:..|......|  .||:.|.| :.::.::.||    .:|..   .::.||.|.:.|.:
 Frog   848 EQLKTLKKTMDDLDRASK--ADVQKRVLEITKQLIEEHPNQPLLVLEMENGASAKALNESLKLLK 910

  Fly   919 ATKLCPDRPILVISVCDSVVKARC-C-VPEKCITEKFNASAWLQSFADTFNGQIAAPKGQNPQAV 981
            :..  |....::.||.:...|..| | ||:....:...|:.|:|..:|..:|: ...|..:.||.
 Frog   911 SQS--PHTAAMIFSVDNDAGKITCLCQVPQDTADKGLKANEWVQQVSDLMDGR-GGGKDTSAQAT 972

  Fly   982 CNMKGRRVSNLFEEQLEQAMSKAHAYAKLYL 1012
                |:.|.     .|.|.:..|..:||:.|
 Frog   973 ----GKNVG-----CLSQVLKLAEDFAKMKL 994

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlaRS-mNP_523932.2 PLN02900 13..1010 CDD:215487 357/1059 (34%)
AlaRS_core 14..261 CDD:238360 143/251 (57%)
tRNA_SAD 570..>667 CDD:298782 30/96 (31%)
tRNA_SAD 748..>784 CDD:197931 13/46 (28%)
aars1XP_017948852.2 PLN02900 36..992 CDD:215487 357/1060 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG60684
OrthoDB 1 1.010 - - D129373at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11777
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.030

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