DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gen and exo1

DIOPT Version :9

Sequence 1:NP_647943.2 Gene:Gen / 38594 FlyBaseID:FBgn0263831 Length:726 Species:Drosophila melanogaster
Sequence 2:XP_002932663.3 Gene:exo1 / 100487930 XenbaseID:XB-GENE-982078 Length:736 Species:Xenopus tropicalis


Alignment Length:808 Identity:171/808 - (21%)
Similarity:263/808 - (32%) Gaps:277/808 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGVKELWGVLTPHCERKPINELRGKKVAIDLAGWV-------CESL-------NVVDY---FVHP 48
            ||::.|...|....|...:.:.:||.||:|...|:       .|.|       ..|.:   ||| 
 Frog     1 MGIQGLLQFLKEASEPIHVKKYKGKTVAVDTYCWLHKGAFACAEKLAKGEPTDQYVQFCMKFVH- 64

  Fly    49 RHHLKNLFFRTCYLIWEQVTPVFVLEG-VAPKLKSQVIAKRNELQ---------FRGVKPKNSPE 103
                        .|:...|.|:.|.:| ..|..|....|:|.:.|         .|..|...:.|
 Frog    65 ------------MLLSFGVKPILVFDGCTLPSKKDVEKARREKRQTNLQKGKQLLREGKLAEARE 117

  Fly   104 C-------TQSQPSKGDKGRSRFNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVI 161
            |       |.|..          :.|:|...    :.||.|:..|.||::..|:|||:...:.:|
 Frog   118 CFARSVNITSSMA----------HDVIKAAR----AEGIDCIVAPFEADSQLAYLNKNEFAEAII 168

  Fly   162 SQDSDCFAYGAVRVYRNFSVSTQGA---QAAAGGAVDIYDMREITSRMDFGQQKIIVMALLCGCD 223
            ::|||..|:|..:|.........|.   ||..|....:.|:        |.::|...|.:|.|||
 Frog   169 TEDSDLLAFGCKKVILKMDKFGNGLEIDQARFGMCRSLGDV--------FTEEKFRYMCILSGCD 225

  Fly   224 YCPD--GIGGIGKDGVLKLFNKYKETEILDRMRSWRGETDKYNALEIRVDDKSICSNCGHIGKTQ 286
            |.|.  |||......:||:.|....|.::.::       .:|....|.|.|       |:|    
 Frog   226 YLPSIHGIGLAKACKLLKIANNPDITTVIKKI-------GQYLKTNITVPD-------GYI---- 272

  Fly   287 SHTKSGCSVCRTHKGCDESLWKEQRLSIKSELTLRRKALLSPDFPNEEIIAEFLSEP-------- 343
                                          |..||         .|...:.:.:.:|        
 Frog   273 ------------------------------EGFLR---------ANNTFLYQLVFDPVERKLIPL 298

  Fly   344 ----DTIPNLNLNWRQPNL--------------VKFIKQIGHLLQWPEIYCFQKFFPILT-RWQV 389
                |.:....|::..||:              :..:|||..         :....|.|: |.|.
 Frog   299 NPYGDDVNPEELSYAGPNMGDSVALQIALGNMDINTMKQIDD---------YNPDNPQLSHRSQS 354

  Fly   390 QQSKQEKILIQPHEIIKKRTVKGVPSLELRWHDPSGIFKGLIPDKQIAEYEAEHPKGIEELYYTI 454
            ..|||             ...||..:..: ||..|.      |.|...| |...|:|:       
 Frog   355 WDSKQ-------------LNRKGAHTNSI-WHTKSE------PCKNKNE-EKHSPRGL------- 391

  Fly   455 EPLDMLETAYPDLVAAFLKSKEKPAKK-------TTRKKKTASEEENKENEPN-SKPKRVVRKIK 511
                            .|.||::..|:       .|......|..:||:..|: ..|   |.::.
 Frog   392 ----------------ILSSKKQTVKRPYEDGVSDTDLLSQYSFSKNKKARPDRDSP---VHQVP 437

  Fly   512 AQPEENQPL--------LHQ---------FLGRKKE--------GTPVK---APAPQRQQCSTPI 548
            |.....|||        .||         ||.|:||        ||..:   .||.::..|:   
 Frog   438 ASTTILQPLDGANTKEPKHQPKTRNAFATFLQRQKEDCRSVSATGTRSRFFYKPADEKPHCT--- 499

  Fly   549 TKFLPSDLESDCDAEEFDMSDIVKG-IISNPNAKPALTNHDGHQLHYEPMAEDLSLRLAQMSLGN 612
               |..|:....:.::.    :.|| |:..|...|.|.    .:.:.:...||.|:.:.:...||
 Frog   500 ---LTDDVSHLAEKDQI----VCKGSILEIPKETPLLV----EEQNIKTEKEDTSIIIEECKQGN 553

  Fly   613 VNESPKVETKRDLSQVDQLPQSKRFSLEDSFDLLVKGDLQKLARTPVERFKMQHRISEKI----- 672
            ...||....:|..:....|......:.:.|..||   .|||..|| ....|..:.:..|.     
 Frog   554 KWISPLQNQRRCFTWSGSLVSESSLAPKQSPMLL---SLQKFNRT-APSMKEHNEVESKCNWQAS 614

  Fly   673 ---PTPVKPLDNISYFFNQSSDNADVFE 697
               ...|.|||:......|..::||:.|
 Frog   615 CTKSDTVSPLDSNEKLLKQDIEDADLDE 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GenNP_647943.2 PIN_GEN1 1..385 CDD:189039 92/448 (21%)
H3TH_GEN1 210..342 CDD:188625 25/133 (19%)
exo1XP_002932663.3 PIN_EXO1 1..201 CDD:350207 55/226 (24%)
H3TH_EXO1 213..289 CDD:188628 25/132 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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