Protein Alignment Srp54k and AT5G49500

DIOPT Version :10

• Sequence 1: NP_523931.1
• Gene: Srp54k / 38593
• FlyBaseID: FBgn0010747
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: NP_199761.1
• Gene: AT5G49500 / 835010
• AraportID: AT5G49500
• Length: 497
• Species: Arabidopsis thaliana
• Alignment Length: 514
• Identity: 253/514 - (49%)
• Similarity: 368/514 - (71%)
• Gaps: 25/514 - (4%)

  Fly     1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVIDFDEM 65
            ||||:||.:|.:|:..::..|:|:|:|||..|.||..|||::||:..|||:::.|::.:::.:::
plant     1 MVLAELGGRIMSAIQKMNNVTIIDEKALNDCLNEITRALLQSDVSFPLVKEMQTNIKKIVNLEDL 65

  Fly    66 AGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGS--GKTTTCTKLAYHYQKR 128
            |.|.||||:|:.|:|.||.|::|||...:.|.|.|.:|||||||||.  .|......:....:::
plant    66 AAGHNKRRIIEQAIFSELCKMLDPGKSAFAPKKAKPSVVMFVGLQGEVLEKPQLVPSMLIIIRRK 130

  Fly   129 NWKSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEMIIVDTSG 193
            .:|..|||||||||||:||:||||||::||:|||||..|||.||.:|||.||:|..::|||||||
plant   131 GYKPALVCADTFRAGAFDQLKQNATKSKIPYYGSYTGSDPVKIAVEGVDRFKKENCDLIIVDTSG 195

  Fly   194 RHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKVDIGSVIITKLDGHAKGGG 258
            ||||:.||||||..:|.|..||.:|||||::|||....||:|||..|.:|:|||||:||||||||
plant   196 RHKQQASLFEEMRQISEATKPDLVIFVMDSSIGQTAFEQARAFKQTVAVGAVIITKMDGHAKGGG 260

  Fly   259 ALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDIEGLIDKVNE-LKLDGNDELLEKI 322
            .|||||||:||:||||||||:|:.|.|..|||||:|||.||:.|.::|:.| :..|...||||.:
plant   261 TLSAVAATKSPVIFIGTGEHMDEFEVFDAKPFVSRLLGNGDMSGFVNKLQEVVPKDQQPELLEML 325

  Fly   323 KHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNEL 387
            .||.||:|.||:||||::.|||..:..:|:||...:.|.:|.|:||.|::||.|||||||::.||
plant   326 SHGKFTLRIMYDQFQNMLNMGPLKEVFSMLPGMRAEMMPEGHEKESQAKIKRYMTMMDSMTNEEL 390

  Fly   388 DNRDGAKLFSKQPNRCVRVAQGAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDM---TKN 449
            |: ...|:|::  :|.:|:|:|:|.:.|||.|::..|.:.:.:..|:.|:|.| ::|:|   :||
plant   391 DS-SNPKVFNE--SRIMRIARGSGRIVREVMEMLEEYKRLTTMWGKVKGLKNL-EKGNMSALSKN 451

  Fly   450 VNPTQMAKLNQQIAKMIDPRMLQQMGGVGGIQNMMRQLQQGAAGGLGGLGNLMSGFGGK 508
            .|       :||::|::..:||:|:||:.|:|::|:|:..|.        :||..|||:
plant   452 KN-------SQQLSKVLPAQMLKQIGGMSGLQSLMKQMGSGK--------DLMGMFGGR 495

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srp54k	NP_523931.1	SRP54_euk	2..428	CDD:273615	225/428 (53%)
AT5G49500	NP_199761.1	SRP54_euk	2..430	CDD:273615	225/430 (52%)