Protein Alignment Srp54k and CPSRP54

DIOPT Version :9

• Sequence 1: NP_523931.1
• Gene: Srp54k / 38593
• FlyBaseID: FBgn0010747
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: NP_196014.1
• Gene: CPSRP54 / 830273
• AraportID: AT5G03940
• Length: 564
• Species: Arabidopsis thaliana
• Alignment Length: 447
• Identity: 136/447 - (30%)
• Similarity: 238/447 - (53%)
• Gaps: 22/447 - (4%)

  Fly     2 VLADLGRKITTALHS----LSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVIDF 62
            |.|::..::|..|.:    |....|:.::.:...:::|..|||||||::.:|::..::|.
plant    73 VRAEMFGQLTGGLEAAWSKLKGEEVLTKDNIAEPMRDIRRALLEADVSLPVVRRFVQSVS----- 132

  Fly    63 DEMAG-----GLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTKLA 122
            |:..|     |:...:.:...|..|||||:...|...|..|....|::..||||.||||.|.|||
plant   133 DQAVGMGVIRGVKPDQQLVKIVHDELVKLMGGEVSELQFAKSGPTVILLAGLQGVGKTTVCAKLA 197

  Fly   123 YHYQKRNWKSC-LVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEM 186
            . |.|:..||| |:..|.:|..|.||:.....:..:|.|.:.|::.|..||:.|:...|:...::
plant   198 C-YLKKQGKSCMLIAGDVYRPAAIDQLVILGEQVGVPVYTAGTDVKPADIAKQGLKEAKKNNVDV 261

  Fly   187 IIVDTSGRHKQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKVDIGSVIITKLD 251
            :|:||:||.:.::.:.:|:..|...::|..::.|:||..||...|....|..::.|...|:||||
plant   262 VIMDTAGRLQIDKGMMDELKDVKKFLNPTEVLLVVDAMTGQEAAALVTTFNVEIGITGAILTKLD 326

  Fly   252 GHAKGGGALSAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDIEGLIDKVNE-LKLDGN 315
            |.::||.|||....:..||..:|.||.::|||||.......::|||||:...::|..| ::.:..
plant   327 GDSRGGAALSVKEVSGKPIKLVGRGERMEDLEPFYPDRMAGRILGMGDVLSFVEKATEVMRQEDA 391

  Fly   316 DELLEKIKHGHFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDFMTKGGEQESMARVKRMMTMMD 380
            ::|.:||....|...|..:|.:.:.|||..::.:.||||..:  ::....:|:...:..|..|::
plant   392 EDLQKKIMSAKFDFNDFLKQTRAVAKMGSMTRVLGMIPGMGK--VSPAQIREAEKNLLVMEAMIE 454

  Fly   381 SMSDNELDNRDGAKLFSKQPNRCVRVAQGAGVMEREVKELIAHYTKFSAVVKKMGGV 437
            .|:..|   |:..:|.::.|.|..|:|:.:|..|::|..|:|...:....:|.:.||
plant   455 VMTPEE---RERPELLAESPERRKRIAKDSGKTEQQVSALVAQIFQMRVKMKNLMGV 508

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srp54k	NP_523931.1	SRP54_euk	2..428	CDD:273615	133/436 (31%)
		SRP54_N	6..83	CDD:280954	18/85 (21%)
		SRP54	102..294	CDD:278855	69/192 (36%)
		SRP_SPB	327..428	CDD:281039	26/100 (26%)
CPSRP54	NP_196014.1	PRK10867	77..507	CDD:236780	132/440 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0541
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D463152at2759
OrthoFinder	1	1.000	-	-		FOG0002467
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100507
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1645
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	7	6.680