DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Srp54k and CID9

DIOPT Version :9

Sequence 1:	NP_523931.1	Gene:	Srp54k / 38593	FlyBaseID:	FBgn0010747	Length:	508	Species:	Drosophila melanogaster
Sequence 2:	NP_188063.1	Gene:	CID9 / 820668	AraportID:	AT3G14450	Length:	327	Species:	Arabidopsis thaliana

Alignment Length:	177	Identity:	36/177 - (20%)
Similarity:	62/177 - (35%)	Gaps:	37/177 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    85 KLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTKLAYHYQKRNWKSCLVCADTFRAGAYDQVK 149
            |::|.|::       |:::.       ..||.|.::|..|.....:|.....|..|....||..|
plant    26 KIIDEGIE-------KSSIT-------DSKTETESRLDMHKLVAMFKKLNPLAKEFFPSYYDPKK 76

  Fly   150 QNATKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEMIIVDT----SGRHKQEESLFEEMLA--V 208
            .|.......|           :..|..:..|::..|...:|.    :.|.::..|.....|.  :
plant    77 NNQVAKANQF-----------LPADDFETTKKQSGEEFDLDAKKDDNTRKRRNYSQGRRRLTGRI 130

  Fly   209 SNAVSPDNI---IFVMDATIGQACEAQAKAFKDKVDIGSVIITKLDG 252
            |.|...|:|   ::|.|.......|..|..|.   :.|.|:..::.|
plant   131 SKAQREDSIRRTVYVSDIDQSVTEEGLAGLFS---NCGQVVDCRICG 174

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Srp54k	NP_523931.1	SRP54_euk	2..428	CDD:273615	36/177 (20%)
		SRP54_N	6..83	CDD:280954
		SRP54	102..294	CDD:278855	32/160 (20%)
		SRP_SPB	327..428	CDD:281039
CID9	NP_188063.1	PAM2	55..72	CDD:284542	3/16 (19%)
		RRM1_CID8_like	139..218	CDD:240905	9/39 (23%)
		RRM2_CID8_like	234..315	CDD:240906
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000