Protein Alignment Srp54k and srek1

DIOPT Version :9

• Sequence 1: NP_523931.1
• Gene: Srp54k / 38593
• FlyBaseID: FBgn0010747
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: XP_002934235.1
• Gene: srek1 / 100329115
• XenbaseID: XB-GENE-491758
• Length: 566
• Species: Xenopus tropicalis
• Alignment Length: 84
• Identity: 13/84 - (15%)
• Similarity: 31/84 - (36%)
• Gaps: 29/84 - (34%)

  Fly   432 KKMGGVKGLFKQGDMTKNVNPTQMA--------------------------KLNQQIAKMIDPRM 470
            |::|.|:.:...||.|:   ||:.|                          |:|.....::.|..
 Frog   224 KQVGDVRFVRMAGDETQ---PTRFAFVEFSDQNSVTRALTFNGVMFGDRPLKINHSNNAIVKPPE 285

  Fly   471 LQQMGGVGGIQNMMRQLQQ 489
            :........::.:|:::::
 Frog   286 MTPQAAAKELEEVMKRVRE 304

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srp54k	NP_523931.1	SRP54_euk	2..428	CDD:273615
		SRP54_N	6..83	CDD:280954
		SRP54	102..294	CDD:278855
		SRP_SPB	327..428	CDD:281039
srek1	XP_002934235.1	RRM1_SREK1	8..87	CDD:240963
		RRM2_SREK1	198..283	CDD:240706	11/61 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000