Protein Alignment Srp54k and Srp54c

DIOPT Version :9

• Sequence 1: NP_523931.1
• Gene: Srp54k / 38593
• FlyBaseID: FBgn0010747
• Length: 508
• Species: Drosophila melanogaster
• Sequence 2: NP_001093580.1
• Gene: Srp54c / 100101806
• MGIID: 3714359
• Length: 504
• Species: Mus musculus
• Alignment Length: 505
• Identity: 386/505 - (76%)
• Similarity: 450/505 - (89%)
• Gaps: 4/505 - (0%)

  Fly     1 MVLADLGRKITTALHSLSKATVINEEALNSMLKEICAALLEADVNIRLVKQLRENVRAVIDFDEM 65
            |||||||||||:||.|||.||:||||.||:||||:|.|||||||||:|||||||||::.||.:||
Mouse     1 MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKSAIDLEEM 65

  Fly    66 AGGLNKRRMIQSAVFKELVKLVDPGVKPYQPIKGKANVVMFVGLQGSGKTTTCTKLAYHYQKRNW 130
            |.|||||:|||.|||||||||||||||.:.|.|||.||:||||||||||||||:||||:||::.|
Mouse    66 ASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCSKLAYYYQRKGW 130

  Fly   131 KSCLVCADTFRAGAYDQVKQNATKARIPFYGSYTEIDPVVIAQDGVDMFKREGFEMIIVDTSGRH 195
            |:||:|||||||||:||:|||||||||||||||||:|||:||.:||:.||.|.||:|||||||||
Mouse   131 KTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRH 195

  Fly   196 KQEESLFEEMLAVSNAVSPDNIIFVMDATIGQACEAQAKAFKDKVDIGSVIITKLDGHAKGGGAL 260
            |||:|||||||.||||:.||||::||||:|||||||||||||||||:.|||:|||||||||||||
Mouse   196 KQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGAL 260

  Fly   261 SAVAATQSPIIFIGTGEHIDDLEPFKTKPFVSKLLGMGDIEGLIDKVNELKLDGNDELLEKIKHG 325
            ||||||:||||||||||||||.|||||:||:||||||||||||||||||||||.|..|:||.|||
Mouse   261 SAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNKALIEKWKHG 325

  Fly   326 HFTIRDMYEQFQNIMKMGPFSQFMNMIPGFSQDFMTKGGEQESMARVKRMMTMMDSMSDNELDNR 390
            .||:||||||||||||||||||.:.|||||..|||:||.|||||||:|::||:||||:|.|||:.
Mouse   326 QFTLRDMYEQFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDST 390

  Fly   391 DGAKLFSKQPNRCVRVAQGAGVMEREVKELIAHYTKFSAVVKKMGGVKGLFKQGDMTKNVNPTQM 455
            ||||:|||.|.|..|||:|:||..|:::||:..||||:.:||||||:|||||.|||:|||:.:||
Mouse   391 DGAKVFSKHPGRIQRVARGSGVSTRDIQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNVSQSQM 455

  Fly   456 AKLNQQIAKMIDPRMLQQMGGVGGIQNMMRQLQQGAAGGLGGLGNLMSGF 505
            ||||||:|||:|||:|..|||:.|:|:||||.||||||.:.|    |.||
Mouse   456 AKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGNMKG----MMGF 501

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srp54k	NP_523931.1	SRP54_euk	2..428	CDD:273615	333/425 (78%)
		SRP54_N	6..83	CDD:280954	59/76 (78%)
		SRP54	102..294	CDD:278855	158/191 (83%)
		SRP_SPB	327..428	CDD:281039	69/100 (69%)
Srp54c	NP_001093580.1	SRP54_euk	2..430	CDD:273615	334/427 (78%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C167833889
Domainoid	1	1.000	348	1.000	Domainoid score	I1030
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	800	1.000	Inparanoid score	I500
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG62209
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0002467
OrthoInspector	1	1.000	-	-		otm42654
orthoMCL	1	0.900	-	-		OOG6_100507
Panther	1	1.100	-	-	O	PTHR11564
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1391
SonicParanoid	1	1.000	-	-		X1645
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	12.930