DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATPsynCF6L and Atp5pf

DIOPT Version :9

Sequence 1:NP_647942.1 Gene:ATPsynCF6L / 38592 FlyBaseID:FBgn0035585 Length:147 Species:Drosophila melanogaster
Sequence 2:XP_038944635.1 Gene:Atp5pf / 94271 RGDID:621376 Length:189 Species:Rattus norvegicus


Alignment Length:109 Identity:23/109 - (21%)
Similarity:34/109 - (31%) Gaps:25/109 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 REYRLKSPKGKPVDPGPEFEAELKEV-----------------TERLALQYGGGEGVDMLEFPKF 84
            |.:...||: .|..|.|.....|.:|                 ||..|   ||.......|..:.
  Rat    49 RRFPRPSPR-LPAQPLPPLPTRLPQVSTNGNGSHSAGDQRKQNTEAAA---GGLRRGKAPEPGRP 109

  Fly    85 KLPDIDIDPISVDDLPENQPKPEKKNRDK----EVKAKEKGGEK 124
            :.|.:...|......||:.|.|....:.:    ..:|.|..|.:
  Rat   110 RGPALPASPQPHSPAPESAPWPSPALQSRLGTAAARAPEASGRR 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsynCF6LNP_647942.1 ATP-synt_F6 9..87 CDD:283226 14/66 (21%)
Atp5pfXP_038944635.1 PHA03269 81..>174 CDD:165527 15/76 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166340805
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4634
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1559269at2759
OrthoFinder 1 1.000 - - FOG0004897
OrthoInspector 1 1.000 - - otm44997
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12441
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4582
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
109.810

Return to query results.
Submit another query.