DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17030 and RAD6

DIOPT Version :10

Sequence 1:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_011457.1 Gene:RAD6 / 852822 SGDID:S000003026 Length:172 Species:Saccharomyces cerevisiae


Alignment Length:144 Identity:40/144 - (27%)
Similarity:76/144 - (52%) Gaps:4/144 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KRMNRELALMLEDKQNLQFRNLLVEPNNIYKWTGLLM-PVAPPYDKGAYKMEIDFPLDYPFKPPR 76
            :|:.|:...|.||.......:.|  |:|:..|..::: |...||:.|.:::.::|..:||.|||.
Yeast     7 RRLMRDFKRMKEDAPPGVSASPL--PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPH 69

  Fly    77 IHINTRMYHLNVNERGQVCVPILEVEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEYRND 141
            :...:.|:|.||...|::|:.||: ..|.||..:..:|..:.:..|||.|.:..::|.|..:::.
Yeast    70 VKFLSEMFHPNVYANGEICLDILQ-NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDH 133

  Fly   142 PVRFFKMADAWVQK 155
            ..::.|.....|:|
Yeast   134 KSQYVKRVKETVEK 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17030NP_647941.1 UBCc_UBE2L3 11..158 CDD:467421 40/144 (28%)
RAD6NP_011457.1 UBCc_UBE2A_2B 3..145 CDD:467410 38/140 (27%)

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