DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17030 and RAD6

DIOPT Version :9

Sequence 1:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_011457.1 Gene:RAD6 / 852822 SGDID:S000003026 Length:172 Species:Saccharomyces cerevisiae


Alignment Length:144 Identity:40/144 - (27%)
Similarity:76/144 - (52%) Gaps:4/144 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KRMNRELALMLEDKQNLQFRNLLVEPNNIYKWTGLLM-PVAPPYDKGAYKMEIDFPLDYPFKPPR 76
            :|:.|:...|.||.......:.|  |:|:..|..::: |...||:.|.:::.::|..:||.|||.
Yeast     7 RRLMRDFKRMKEDAPPGVSASPL--PDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPH 69

  Fly    77 IHINTRMYHLNVNERGQVCVPILEVEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEYRND 141
            :...:.|:|.||...|::|:.||: ..|.||..:..:|..:.:..|||.|.:..::|.|..:::.
Yeast    70 VKFLSEMFHPNVYANGEICLDILQ-NRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDH 133

  Fly   142 PVRFFKMADAWVQK 155
            ..::.|.....|:|
Yeast   134 KSQYVKRVKETVEK 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17030NP_647941.1 COG5078 12..158 CDD:227410 40/144 (28%)
UQ_con 14..153 CDD:278603 38/139 (27%)
RAD6NP_011457.1 COG5078 1..150 CDD:227410 40/144 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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