DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17030 and Ube2d2b

DIOPT Version :9

Sequence 1:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001263326.1 Gene:Ube2d2b / 73318 MGIID:1920568 Length:147 Species:Mus musculus


Alignment Length:156 Identity:51/156 - (32%)
Similarity:80/156 - (51%) Gaps:24/156 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 KRMNRELALMLEDKQNLQFRNLLVEP----------NNIYKWTGLLM-PVAPPYDKGAYKMEIDF 66
            ||:::||            .:|..:|          .:::.|...:| |...||..||:.:.|||
Mouse     4 KRIHKEL------------NDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDF 56

  Fly    67 PLDYPFKPPRIHINTRMYHLNVNERGQVCVPILEVEHWIPTTRIDQVLQVLLATINDPQPENAWH 131
            |.:||||||::...||:||.|||..|.:|:.||. ..|.|...|.:||..:.:.:.||.|::...
Mouse    57 PTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-SQWSPALTISKVLLSISSLLCDPNPDDPLV 120

  Fly   132 IEMAGEYRNDPVRFFKMADAWVQKYS 157
            .|:|..|:.|..::.:.|..|.|||:
Mouse   121 PEIAQIYKTDRDKYNRTAREWTQKYA 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17030NP_647941.1 COG5078 12..158 CDD:227410 51/156 (33%)
UQ_con 14..153 CDD:278603 46/149 (31%)
Ube2d2bNP_001263326.1 UBCc 1..146 CDD:412187 50/154 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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