DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17030 and Ubc10

DIOPT Version :10

Sequence 1:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_477414.1 Gene:Ubc10 / 37035 FlyBaseID:FBgn0026316 Length:154 Species:Drosophila melanogaster


Alignment Length:155 Identity:71/155 - (45%)
Similarity:111/155 - (71%) Gaps:1/155 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 MDGPKRMNRELALMLEDKQNLQFRNLLVEPNNIYKWTGLLMPVAPPYDKGAYKMEIDFPLDYPFK 73
            |..|:|:.:||: .|:......||::..:.:|:.:||||::|..|||:|||:::||:||.:||||
  Fly     1 MTAPRRLRKELS-DLQGNALKSFRDIKADDDNLLRWTGLIVPDNPPYNKGAFRIEINFPAEYPFK 64

  Fly    74 PPRIHINTRMYHLNVNERGQVCVPILEVEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEY 138
            ||:|:..||:||.|::|:||||:||:..|:|.|.||.|||:|.|:..||||:||:....|:|.|:
  Fly    65 PPKINFKTRIYHPNIDEKGQVCLPIISTENWKPATRTDQVVQALVDLINDPEPEHPLRAELAEEF 129

  Fly   139 RNDPVRFFKMADAWVQKYSEPRPTE 163
            ..|..:|.|.|:.:.:|:||.||.:
  Fly   130 LKDRKKFVKNAEDYTKKHSEKRPAD 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17030NP_647941.1 UBCc_UBE2L3 11..158 CDD:467421 66/146 (45%)
Ubc10NP_477414.1 UBCc_UBE2L3 3..149 CDD:467421 66/146 (45%)

Return to query results.
Submit another query.