DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17030 and CG7220

DIOPT Version :10

Sequence 1:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_724964.2 Gene:CG7220 / 36129 FlyBaseID:FBgn0033544 Length:190 Species:Drosophila melanogaster


Alignment Length:279 Identity:50/279 - (17%)
Similarity:96/279 - (34%) Gaps:68/279 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 VRELSKSMFSPGTL-VEVSCVIDKVEVSWVTAMIVKEIEESGEKKFIVK---VCNKHLSCRVDEA 202
            ||::|....:|..| ..|..:...|..:.:..|...:..:..::|:.:.   |||.: ...:..:
  Fly    48 VRDVSDITGAPEMLGGRVKTLHPAVHAAILARMTESDQRDISQQKYELAQLVVCNLY-PFGLTIS 111

  Fly   203 KPNMTVDSCCVRPRPPLFFVEEYDLRDCVEVFHGSSWRQGVVKGVHIEKQYTVTLEATKDKLVVK 267
            ||::|:...          ||..|:.. |.:...::.....|..:...|.|...||..:     :
  Fly   112 KPDVTIADA----------VENIDIGG-VTLLRAAAKNHQRVTVLCDPKDYPKVLEEIR-----Q 160

  Fly   268 HSDLRPF-------------------------KVWEDGV------WHNGPQQKP------VKESP 295
            |.|..|.                         |.:..||      :...|.|||      ::..|
  Fly   161 HGDTTPATRQLLALKAFTHTAEYDAIISDYFRKQYSAGVSQLNLRYGMNPHQKPAQIFTLLERLP 225

  Fly   296 SNAIKQKP----MCSSSGARPMTPKMATK---HARISFNPEENVEELSVAETVAATGKLEKMGIA 353
            ...:...|    :|.:.....:..::...   .|..||   ::|.....|..||.:.:..|:.:.
  Fly   226 LKVVNASPGFINLCDALNGWQLVRELKRALGLPAATSF---KHVSPAGAAVGVALSLEQAKLCMV 287

  Fly   354 EESVSCVTPLKQTEANAEG 372
            ::.:..:||:....|.|.|
  Fly   288 DDMMDSLTPMATAYARARG 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17030NP_647941.1 UBCc_UBE2L3 11..158 CDD:467421 5/16 (31%)
CG7220NP_724964.2 UBCc_UBE2W 44..164 CDD:467428 25/132 (19%)

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