DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17030 and CG4502

DIOPT Version :10

Sequence 1:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_609103.1 Gene:CG4502 / 34002 FlyBaseID:FBgn0031896 Length:306 Species:Drosophila melanogaster


Alignment Length:138 Identity:35/138 - (25%)
Similarity:60/138 - (43%) Gaps:25/138 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EEPLMDGPKRMNRELALMLE--DKQNLQFRN---LLVE--PNNIYKWTGLLMPVAP--PYDKG-- 58
            |..|:..|....|...||.|  :.:.||.:|   ..||  .:::::|...|..:.|  |..:.  
  Fly   127 ERQLVAAPDHTIRTRRLMKEYREMERLQAKNDAVFTVELVNDSLFEWHVRLHVIDPDSPLARDMA 191

  Fly    59 -----AYKMEIDFPLDYPFKPP--RI---HINTRMYHLNVNERGQVCVPILEVEHWIPTTRIDQV 113
                 |..:.:.||.::||.||  |:   ||. :.|   |.|.|.:|:.:|....|.....::.|
  Fly   192 EMGVPAILLHLSFPDNFPFAPPFMRVVEPHIE-KGY---VMEGGAICMELLTPRGWASAYTVEAV 252

  Fly   114 LQVLLATI 121
            :....|::
  Fly   253 IMQFAASV 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17030NP_647941.1 UBCc_UBE2L3 11..158 CDD:467421 33/132 (25%)
CG4502NP_609103.1 UBCc_UBE2Q 141..293 CDD:467422 31/124 (25%)

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