DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17030 and ubc-1

DIOPT Version :9

Sequence 1:NP_647941.1 Gene:CG17030 / 38591 FlyBaseID:FBgn0035584 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_001379774.1 Gene:ubc-1 / 177170 WormBaseID:WBGene00006701 Length:192 Species:Caenorhabditis elegans


Alignment Length:136 Identity:34/136 - (25%)
Similarity:67/136 - (49%) Gaps:12/136 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 FRNLLVEP----------NNIYKWTGLLM-PVAPPYDKGAYKMEIDFPLDYPFKPPRIHINTRMY 84
            |:.|..:|          :||..|..::. |...|::.|.:|:.::|..:||.|||.:...::|:
 Worm    13 FKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMF 77

  Fly    85 HLNVNERGQVCVPILEVEHWIPTTRIDQVLQVLLATINDPQPENAWHIEMAGEYRNDPVRFFKMA 149
            |.||...|.:|:.||: ..|.||..:..:|..:.:.:::|.|.:..:...|..|:.:...:.|..
 Worm    78 HPNVYADGSICLDILQ-NRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYEKRV 141

  Fly   150 DAWVQK 155
            ...|::
 Worm   142 QQIVEQ 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17030NP_647941.1 COG5078 12..158 CDD:227410 34/136 (25%)
UQ_con 14..153 CDD:278603 33/132 (25%)
ubc-1NP_001379774.1 UQ_con 8..145 CDD:395127 33/132 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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