DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and LGI1

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_005088.1 Gene:LGI1 / 9211 HGNCID:6572 Length:557 Species:Homo sapiens


Alignment Length:191 Identity:45/191 - (23%)
Similarity:80/191 - (41%) Gaps:44/191 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   256 LCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIGD 320
            |||       |..::...:..|:..|:|:.....:|   :...|....:|.:|..|.|:.:.|.|
Human    54 LCE-------NARSIPRTVPPDVISLSFVRSGFTEI---SEGSFLFTPSLQLLLFTSNSFDVISD 108

  Fly   321 TVFAELWSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQAN 385
            ..|..|..|..|.:::|.|:.||.....||.:|..|:|.||.|:.:...:.:|..:|.:::::. 
Human   109 DAFIGLPHLEYLFIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRG- 172

  Fly   386 KLETLTFYTFQPIMDNLVNSTSELLVSDNKFICDCRLQWIFELKNRTRHLQLRDSLEDLHC 446
                                        |.|.|||:|:|:.|....|     ..::||::|
Human   173 ----------------------------NSFNCDCKLKWLVEWLGHT-----NATVEDIYC 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 45/191 (24%)
leucine-rich repeat 185..208 CDD:275380
leucine-rich repeat 209..232 CDD:275380
leucine-rich repeat 233..256 CDD:275380 45/191 (24%)
leucine-rich repeat 257..280 CDD:275380 4/22 (18%)
leucine-rich repeat 281..304 CDD:275380 4/22 (18%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
leucine-rich repeat 329..352 CDD:275380 8/22 (36%)
leucine-rich repeat 353..376 CDD:275380 7/22 (32%)
LGI1NP_005088.1 leucine-rich repeat 71..92 CDD:275378 4/23 (17%)
LRR_8 91..151 CDD:404697 21/59 (36%)
LRR 1 92..113 7/20 (35%)
leucine-rich repeat 93..116 CDD:275378 8/22 (36%)
LRR 2 116..137 6/20 (30%)
leucine-rich repeat 117..140 CDD:275378 8/22 (36%)
LRR 3 140..161 6/20 (30%)
leucine-rich repeat 141..164 CDD:275378 7/22 (32%)
PCC 146..>221 CDD:188093 18/89 (20%)
leucine-rich repeat 165..177 CDD:275378 3/40 (8%)
EAR 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 225..267
EPTP 225..265 CDD:461033
EAR 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 271..313
EPTP 272..310 CDD:461033
EAR 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 317..364
EPTP 317..362 CDD:461033
EAR 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 366..415
EPTP 366..413 CDD:461033
EAR 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 419..462
EPTP 420..460 CDD:461033
EAR 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 464..506
EPTP 465..504 CDD:461033
EAR 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00075 510..552
EPTP 510..550 CDD:461033
Blue background indicates that the domain is not in the aligned region.

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