DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Con and Tril

DIOPT Version :9

Sequence 1:NP_001246635.1 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_080093.1 Gene:Tril / 66873 MGIID:1914123 Length:809 Species:Mus musculus


Alignment Length:596 Identity:133/596 - (22%)
Similarity:210/596 - (35%) Gaps:164/596 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 PMDSTGFCTRRRDMK----LMC-----YCTPDENHVPVQKAECWVFSEGLHQNDTTWTRFYQQKR 157
            |..:...|..|.|.:    |:|     ...|..:.:|..:.   |.:..|..|..|....:...|
Mouse    20 PPRAESVCPERCDCQHPQHLLCTNRGLRAVPKTSSLPSPQD---VLTYSLGGNFITNITAFDFHR 81

  Fly   158 LRELKFVIQNNARLDYIPTMIIEPLKNLSSIVIEYSQVEIVKSYAFANLPFLERIILNNNHIMAL 222
            |.:|:       |||                 ::|:|:..:....|..|..||.:.|.||.:.||
Mouse    82 LGQLR-------RLD-----------------LQYNQIRSLHPKTFEKLSRLEELYLGNNLLQAL 122

  Fly   223 DQDAFANHIRLRELNLEHNQIFEMDRYAFRNLPLCERLFLNNNNISTLHEGLFADMARLTFLNLA 287
            .....|...:||.|....|:|..:.|.:|..|....:|.|:.|.:..|.:.:||.:..|.:|:|.
Mouse   123 VPGTLAPLRKLRILYANGNEIGRLSRGSFEGLESLVKLRLDGNVLGALPDAVFAPLGNLLYLHLE 187

  Fly   288 HNQINVLTSEIFRGLG--------------------------NLNVLKLTRNNLNFIGDTVFAEL 326
            .|:|..|....|..||                          :|:.|.|:.|:|..:|..||..|
Mouse   188 SNRIRFLGKNAFSQLGKLRFLNLSANELQPSLRHAATFVPLRSLSTLILSANSLQHLGPRVFQHL 252

  Fly   327 WSLSELELDDNRIERISERALDGLNTLKTLNLRNNLLKKIDNGLLRGTPALLSINVQANKLETLT 391
            ..|..|.|..|::..::..|..||..|:.|.|..|.|.::...||....:|.::::..|:|..|.
Mouse   253 PRLGLLSLSGNQLTHLAPEAFWGLEALRELRLEGNRLNQLPLTLLEPLHSLEALDLSGNELSALH 317

  Fly   392 FYTF--------QPIMDNLVNSTS-----------ELLVSDNKFICDCRLQ--------WIFELK 429
            ..||        ..:.||.:::.|           .|.:..|.:.|||||:        |..:.:
Mouse   318 PATFGHQGRLRELSLRDNALSALSGDIFAASPALYRLDLDGNGWTCDCRLRGLKRWMGNWHSQGR 382

  Fly   430 NRTRHLQLR----------DSLEDLHCTLQEPKLSHFVDPVPPTILDVLNIGGFTAIGSNSASMG 484
            ..|..:|.|          |.|:|     |..:....|||.|                  |.:.|
Mouse   383 LLTVFVQCRHPPALRGKYLDYLDD-----QLLQNGSCVDPSP------------------SPTAG 424

  Fly   485 GVGNSVVGSSYSGLTMDDSRKHLGSRSRQALRGQRQ------------FASSAENVVESKMRRRR 537
            .....:..||..|:|     ...|......|:.|.|            :..:|:.:|.::...|.
Mouse   425 SRQWPLPTSSEEGMT-----PPAGLSQELPLQPQPQPQQRGRLLPGVAWGGAAKELVGNRSALRL 484

  Fly   538 KRQEEVKEKDLAAVAP--AHKRYDYYDDNNGGMSLGHGLDLDDNLSLHKQGFYGAGSPVVGHNDV 600
            .|:.....:..:|.||  |.:..|.::      ..|.|.....|||                 ..
Mouse   485 SRRGPGPHQGPSAAAPGSAPQSLDLHE------KPGRGRHTRANLS-----------------QT 526

  Fly   601 DVLMTSHSASG 611
            :...||..|||
Mouse   527 EPTPTSEPASG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_001246635.1 LRR_RI <147..291 CDD:238064 37/143 (26%)
LRR_8 183..243 CDD:290566 16/59 (27%)
leucine-rich repeat 185..208 CDD:275380 4/22 (18%)
leucine-rich repeat 209..232 CDD:275380 8/22 (36%)
LRR_RI <225..416 CDD:238064 58/235 (25%)
LRR_8 232..291 CDD:290566 18/58 (31%)
leucine-rich repeat 233..256 CDD:275380 8/22 (36%)
leucine-rich repeat 257..280 CDD:275380 6/22 (27%)
leucine-rich repeat 281..304 CDD:275380 9/48 (19%)
LRR_8 304..363 CDD:290566 20/58 (34%)
leucine-rich repeat 305..328 CDD:275380 9/22 (41%)
leucine-rich repeat 329..352 CDD:275380 7/22 (32%)
LRR_8 352..416 CDD:290566 18/82 (22%)
leucine-rich repeat 353..376 CDD:275380 7/22 (32%)
LRRCT 414..>450 CDD:214507 13/53 (25%)
TrilNP_080093.1 LRR_RI <11..194 CDD:238064 49/200 (25%)
leucine-rich repeat 37..57 CDD:275378 3/19 (16%)
LRR 1 61..81 4/19 (21%)
LRR_8 84..143 CDD:290566 20/82 (24%)
LRR 2 84..105 7/44 (16%)
leucine-rich repeat 85..108 CDD:275380 8/46 (17%)
LRR 3 108..129 7/20 (35%)
leucine-rich repeat 109..132 CDD:275380 8/22 (36%)
LRR 4 132..153 7/20 (35%)
leucine-rich repeat 133..156 CDD:275380 8/22 (36%)
LRR_8 156..215 CDD:290566 15/58 (26%)
LRR 5 156..177 5/20 (25%)
leucine-rich repeat 157..180 CDD:275380 6/22 (27%)
LRR 6 180..201 7/20 (35%)
leucine-rich repeat 181..204 CDD:275380 8/22 (36%)
LRR 7 204..223 0/18 (0%)
leucine-rich repeat 205..230 CDD:275380 0/24 (0%)
LRR_RI 229..>364 CDD:238064 34/134 (25%)
LRR_8 229..289 CDD:290566 20/59 (34%)
LRR 8 230..251 8/20 (40%)
leucine-rich repeat 231..254 CDD:275380 9/22 (41%)
LRR 9 254..275 5/20 (25%)
leucine-rich repeat 255..278 CDD:275380 7/22 (32%)
LRR 10 278..298 6/19 (32%)
leucine-rich repeat 279..302 CDD:275380 7/22 (32%)
LRR_8 302..359 CDD:290566 10/56 (18%)
LRR 11 302..323 6/20 (30%)
leucine-rich repeat 303..323 CDD:275380 6/19 (32%)
LRR 12 326..347 3/20 (15%)
leucine-rich repeat 327..350 CDD:275380 3/22 (14%)
TPKR_C2 359..406 CDD:301599 12/46 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..462 14/72 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 483..563 17/78 (22%)
FN3 587..659 CDD:214495
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831250
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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