DRSC/TRiP Functional Genomics Resources

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Protein Alignment Con and lrrc24

DIOPT Version :10

Sequence 1:NP_523930.3 Gene:Con / 38590 FlyBaseID:FBgn0005775 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_009297158.2 Gene:lrrc24 / 565790 ZFINID:ZDB-GENE-060503-496 Length:692 Species:Danio rerio


Alignment Length:608 Identity:132/608 - (21%)
Similarity:224/608 - (36%) Gaps:193/608 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 CWVFSEGLHQNDTTWTRFYQQKRLRELKFVIQNNARLDYIPTMIIEPLKNLS----------SIV 189
            |.||||                         .|..::..:..:::..|.:.|          |:.
Zfish    93 CSVFSE-------------------------MNPGQMSAVLVLMLAQLSSTSLACPSGCRCYSLT 132

  Fly   190 IEYSQVEIVKSYAFANLPFLERIILNNNHIMALDQDAFANHIRLRELNLEHNQIFEMDRYAFRNL 254
            :|...:.| |..........:.|.|.:|.|         ..||.|:|:               :|
Zfish   133 VECGSIGI-KEIPQGITQGTQTIFLQDNAI---------GQIRQRDLS---------------DL 172

  Fly   255 PLCERLFLNNNNISTLHEGLFADMARLTFLNLAHNQINVLTSEIFRGLGNLNVLKLTRNNLNFIG 319
            .....|:|.||:||||..|.|..:..|..|.|..|:|:::|:::||||.:|.:|.|..|.:|.:.
Zfish   173 GQLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDHLRILYLAGNQINRLE 237

  Fly   320 DTVFAELWSLSELELDDNRIERISERALDGLNTLKTLNL-RNNLLKKIDNGLLRGTPALLSINVQ 383
            |..|..|..|.||.|.:|.:|.:.::||.||::|..|:| |||                      
Zfish   238 DYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLSRNN---------------------- 280

  Fly   384 ANKLETLTFYTFQPIMDNLVNSTSELLVSDNKFICDCRLQWIFELKNRTRHLQLRDSLEDLHCTL 448
               |.||:..:.:|::     |...|.|:||.:.|||.|.|:....|......|..:...:.|. 
Zfish   281 ---LRTLSPASLKPLV-----SLQVLRVTDNPWRCDCALHWLRGWINEEGQRLLSSAERRMLCA- 336

  Fly   449 QEPKLSHF----VDP-----VPPTILDVLNIGGFTAIGSNSASMGGVGNSVVGSSYSGLTMDDSR 504
            :.|:|||.    |.|     :||.:                                  .::.| 
Zfish   337 EPPRLSHLSLVEVPPNSLVCIPPVV----------------------------------QLEPS- 366

  Fly   505 KHLGSRSRQALRGQRQFASSAENVV--------ESKMRRRRKRQEEVKEKD------LAAVAPAH 555
             ||..|..::||...|.:...:..|        ::::..|...||...:.|      |....|..
Zfish   367 -HLTVRLGESLRVSCQASGYPQPQVTWRKASHGKAQLSPRGLVQEVGMDGDTRNGGRLVTARPGG 430

  Fly   556 K------------RYDYYDDNNGGMSLGHGLDLDDNLSLHKQGFY-------GAGSPVVGHNDVD 601
            |            ..|..|..|.....|.|:....|:::...|.|       |..:.|..|  :.
Zfish   431 KGGPSSHGPIRGGADDGADRENFDPDTGSGMLFLSNVTVAHAGRYECEAWNPGGVARVTFH--LS 493

  Fly   602 VLMTSHSASGDALDILTTKNAIYIKLFLLKPEMLPCHDELSDPTELPLSRD-LMDVRSNVGQDMS 665
            |.|:|.|:..:....|.:.:..:                   |:.:.:|:: |.::.|.....:.
Zfish   494 VNMSSSSSRSEIWPRLHSSSYYH-------------------PSSVDVSQEPLYELESMDFNALG 539

  Fly   666 TAGANSLAQGMTIIVSLVALMMI 688
            ||...::|.|:::: :|.||:::
Zfish   540 TATQTAIAVGISLL-ALTALLLL 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ConNP_523930.3 LRR <157..459 CDD:443914 82/316 (26%)
leucine-rich repeat 185..208 CDD:275380 5/32 (16%)
leucine-rich repeat 209..232 CDD:275380 4/22 (18%)
leucine-rich repeat 233..256 CDD:275380 3/22 (14%)
leucine-rich repeat 257..280 CDD:275380 10/22 (45%)
leucine-rich repeat 281..304 CDD:275380 10/22 (45%)
leucine-rich repeat 305..328 CDD:275380 8/22 (36%)
leucine-rich repeat 329..352 CDD:275380 10/22 (45%)
leucine-rich repeat 353..376 CDD:275380 6/23 (26%)
lrrc24XP_009297158.2 None

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